Analysis of interatomic Contacts of Structural Units in PDB entry:
8QTN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QTN entry

There are 4 chains in PDB entry 8QTN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 75ILE 383
B
 PHE 75LEU 379
C
 PRO 18MET 150
D
 ILE 20MET 150
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8QTN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
75 82Right-handed alpha
Helix 2
AA2
A
84 101Right-handed alpha
Helix 3
AA3
A
110 115Right-handed alpha
Helix 4
AA4
A
130 154Right-handed alpha
Helix 5
AA5
A
154 163Right-handed alpha
Helix 6
AA6
A
166 196Right-handed alpha
Helix 7
AA7
A
205 210Right-handed alpha
Helix 8
AA8
A
217 241Right-handed alpha
Helix 9
AA9
A
248 269Right-handed alpha
Helix 10
AB1
A
271 298Right-handed alpha
Helix 11
AB2
A
301 319Right-handed alpha
Helix 12
AB3
A
319 332Right-handed alpha
Helix 13
AB4
A
352 383Right-handed alpha
Helix 14
AB5
B
76 82Right-handed alpha
Helix 15
AB6
B
84 101Right-handed alpha
Helix 16
AB7
B
110 115Right-handed alpha
Helix 17
AB8
B
130 154Right-handed alpha
Helix 18
AB9
B
154 162Right-handed alpha
Helix 19
AC1
B
166 196Right-handed alpha
Helix 20
AC2
B
205 210Right-handed alpha
Helix 21
AC3
B
217 241Right-handed alpha
Helix 22
AC4
B
248 269Right-handed alpha
Helix 23
AC5
B
271 298Right-handed alpha
Helix 24
AC6
B
301 319Right-handed alpha
Helix 25
AC7
B
319 331Right-handed alpha
Helix 26
AC8
B
331 336Right-handed alpha
Helix 27
AC9
B
352 379Right-handed alpha
Helix 28
AD1
C
19 47Right-handed alpha
Helix 29
AD2
C
47 52Right-handed alpha
Helix 30
AD3
C
76 89Right-handed alpha
Helix 31
AD4
C
134 143Right-handed alpha
Helix 32
AD5
D
21 47Right-handed alpha
Helix 33
AD6
D
47 52Right-handed alpha
Helix 34
AD7
D
76 92Right-handed alpha
Helix 35
AD8
D
134 143Right-handed alpha
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There are 2 sheets in PDB entry 8QTN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 59first strand
Strand 2
C
65 71anti-parallel
Strand 3
C
125 131anti-parallel
Strand 4
C
99 105anti-parallel
Strand 5
C
148 149anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 61first strand
Strand 2
D
64 71anti-parallel
Strand 3
D
125 131anti-parallel
Strand 4
D
99 105anti-parallel
Strand 5
D
148 150anti-parallel
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