Analysis of interatomic Contacts of Structural Units in PDB entry:
8QUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QUT entry

There are 10 chains in PDB entry 8QUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 22CYS 128
B
 UNK 2UNK 11
C
 GLY 22CYS 128
D
 UNK 2UNK 11
E
 GLY 22CYS 128
F
 UNK 2UNK 11
G
 GLY 22CYS 128
H
 UNK 2UNK 11
I
 GLY 22CYS 128
J
 UNK 2UNK 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8QUT

There are 11 sheets in PDB entry 8QUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 27first strand
Strand 2
C
23 27parallel
Strand 3
E
23 24parallel
Strand 4
G
23 24parallel
Strand 5
I
23 24parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
C
54 58parallel
Strand 3
E
54 58parallel
Strand 4
G
54 58parallel
Strand 5
I
54 58parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
C
62 63parallel
Strand 3
E
62 63parallel
Strand 4
G
62 63parallel
Strand 5
I
62 63parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 69first strand
Strand 2
C
68 69parallel
Strand 3
E
68 69parallel
Strand 4
G
68 69parallel
Strand 5
I
68 69parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
C
74 75parallel
Strand 3
E
74 75parallel
Strand 4
G
74 75parallel
Strand 5
I
74 75parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
C
78 79parallel
Strand 3
E
78 79parallel
Strand 4
G
78 79parallel
Strand 5
I
78 79parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
C
83 87parallel
Strand 3
E
83 87parallel
Strand 4
G
83 87parallel
Strand 5
I
83 87parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 101first strand
Strand 2
C
96 101parallel
Strand 3
E
96 101parallel
Strand 4
G
96 101parallel
Strand 5
I
96 101parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 112first strand
Strand 2
C
107 112parallel
Strand 3
E
107 112parallel
Strand 4
G
107 112parallel
Strand 5
I
107 112parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 125first strand
Strand 2
C
115 125parallel
Strand 3
E
115 125parallel
Strand 4
G
115 125parallel
Strand 5
I
115 125parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 10first strand
Strand 2
D
3 10parallel
Strand 3
F
3 10parallel
Strand 4
H
3 10parallel
Strand 5
J
3 10parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il