Analysis of interatomic Contacts of Structural Units in PDB entry:
8QV8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QV8 entry

There are 15 chains in PDB entry 8QV8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 26SER 100
B
 UNK 1UNK 9
C
 GLY 26SER 100
D
 UNK 1UNK 9
E
 GLY 26SER 100
F
 UNK 1UNK 9
G
 GLY 26SER 100
H
 UNK 1UNK 9
I
 GLY 26SER 100
J
 UNK 1UNK 9
K
 UNK 101UNK 108
L
 UNK 101UNK 108
M
 UNK 101UNK 108
N
 UNK 101UNK 108
O
 UNK 101UNK 108
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 8QV8

There are 11 sheets in PDB entry 8QV8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
C
28 30parallel
Strand 3
E
28 30parallel
Strand 4
G
28 30parallel
Strand 5
I
28 30parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
C
33 38parallel
Strand 3
E
33 38parallel
Strand 4
G
33 38parallel
Strand 5
I
33 38parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
C
43 45parallel
Strand 3
E
43 45parallel
Strand 4
G
43 45parallel
Strand 5
I
43 45parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
C
51 52parallel
Strand 3
E
51 52parallel
Strand 4
G
51 52parallel
Strand 5
I
51 52parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 62first strand
Strand 2
C
55 62parallel
Strand 3
E
55 62parallel
Strand 4
G
55 62parallel
Strand 5
I
55 62parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
C
73 74parallel
Strand 3
E
73 74parallel
Strand 4
G
73 74parallel
Strand 5
I
73 74parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
C
80 83parallel
Strand 3
E
80 83parallel
Strand 4
G
80 83parallel
Strand 5
I
80 83parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
C
89 91parallel
Strand 3
E
89 91parallel
Strand 4
G
89 91parallel
Strand 5
I
89 91parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 99first strand
Strand 2
C
95 99parallel
Strand 3
E
95 99parallel
Strand 4
G
95 99parallel
Strand 5
I
95 99parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 8first strand
Strand 2
D
2 8parallel
Strand 3
F
2 8parallel
Strand 4
H
2 8parallel
Strand 5
J
2 8parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
103 104first strand
Strand 2
L
103 104parallel
Strand 3
M
103 104parallel
Strand 4
N
103 104parallel
Strand 5
O
103 104parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il