Analysis of interatomic Contacts of Structural Units in PDB entry:
8QWB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8QWB entry

There are 4 chains in PDB entry 8QWB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	SER 374
B	GLU 24	ASP 375
C	LYS 25	ASP 375
D	GLU 24	SER 360

There are200 helices in PDB entry 8QWB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	40	Right-handed alpha
Helix 2	AA2	A	43	54	Right-handed alpha
Helix 3	AA3	A	58	71	Right-handed alpha
Helix 4	AA4	A	76	86	Right-handed alpha
Helix 5	AA5	A	91	107	Right-handed alpha
Helix 6	AA6	A	123	148	Right-handed alpha
Helix 7	AA7	A	160	171	Right-handed alpha
Helix 8	AA8	A	175	189	Right-handed alpha
Helix 9	AA9	A	195	207	Right-handed alpha
Helix 10	AB1	A	210	224	Right-handed alpha
Helix 11	AB2	A	224	229	Right-handed alpha
Helix 12	AB3	A	230	234	Right-handed 310
Helix 13	AB4	A	273	289	Right-handed alpha
Helix 14	AB5	A	299	310	Right-handed alpha
Helix 15	AB6	A	311	314	Right-handed 310
Helix 16	AB7	A	321	332	Right-handed alpha
Helix 17	AB8	A	335	337	Right-handed 310
Helix 18	AB9	A	338	357	Right-handed alpha
Helix 19	AC1	A	358	360	Right-handed 310
Helix 20	AC2	B	34	40	Right-handed alpha
Helix 21	AC3	B	43	54	Right-handed alpha
Helix 22	AC4	B	58	70	Right-handed alpha
Helix 23	AC5	B	76	85	Right-handed alpha
Helix 24	AC6	B	91	107	Right-handed alpha
Helix 25	AC7	B	124	147	Right-handed alpha
Helix 26	AC8	B	160	171	Right-handed alpha
Helix 27	AC9	B	175	189	Right-handed alpha
Helix 28	AD1	B	195	207	Right-handed alpha
Helix 29	AD2	B	210	223	Right-handed alpha
Helix 30	AD3	B	229	234	Right-handed alpha
Helix 31	AD4	B	273	289	Right-handed alpha
Helix 32	AD5	B	303	310	Right-handed alpha
Helix 33	AD6	B	321	332	Right-handed alpha
Helix 34	AD7	B	335	337	Right-handed 310
Helix 35	AD8	B	338	362	Right-handed alpha
Helix 36	AD9	B	367	372	Right-handed alpha
Helix 37	AE1	C	34	40	Right-handed alpha
Helix 38	AE2	C	43	54	Right-handed alpha
Helix 39	AE3	C	58	73	Right-handed alpha
Helix 40	AE4	C	76	86	Right-handed alpha
Helix 41	AE5	C	91	104	Right-handed alpha
Helix 42	AE6	C	123	148	Right-handed alpha
Helix 43	AE7	C	160	171	Right-handed alpha
Helix 44	AE8	C	175	189	Right-handed alpha
Helix 45	AE9	C	195	206	Right-handed alpha
Helix 46	AF1	C	210	224	Right-handed alpha
Helix 47	AF2	C	229	235	Right-handed alpha
Helix 48	AF3	C	273	289	Right-handed alpha
Helix 49	AF4	C	300	308	Right-handed alpha
Helix 50	AF5	C	321	333	Right-handed alpha
Helix 51	AF6	C	335	337	Right-handed 310
Helix 52	AF7	C	338	361	Right-handed alpha
Helix 53	AF8	D	34	42	Right-handed alpha
Helix 54	AF9	D	43	54	Right-handed alpha
Helix 55	AG1	D	58	70	Right-handed alpha
Helix 56	AG2	D	76	85	Right-handed alpha
Helix 57	AG3	D	91	105	Right-handed alpha
Helix 58	AG4	D	123	149	Right-handed alpha
Helix 59	AG5	D	160	171	Right-handed alpha
Helix 60	AG6	D	175	189	Right-handed alpha
Helix 61	AG7	D	195	206	Right-handed alpha
Helix 62	AG8	D	210	224	Right-handed alpha
Helix 63	AG9	D	228	232	Right-handed 310
Helix 64	AH1	D	234	238	Right-handed 310
Helix 65	AH2	D	273	289	Right-handed alpha
Helix 66	AH3	D	301	309	Right-handed alpha
Helix 67	AH4	D	321	333	Right-handed alpha
Helix 68	AH5	D	335	337	Right-handed 310
Helix 69	AH6	D	338	357	Right-handed alpha
Helix 70	AH7	E	35	40	Right-handed alpha
Helix 71	AH8	E	43	53	Right-handed alpha
Helix 72	AH9	E	58	70	Right-handed alpha
Helix 73	AI1	E	76	86	Right-handed alpha
Helix 74	AI2	E	91	104	Right-handed alpha
Helix 75	AI3	E	123	148	Right-handed alpha
Helix 76	AI4	E	160	171	Right-handed alpha
Helix 77	AI5	E	175	189	Right-handed alpha
Helix 78	AI6	E	196	207	Right-handed alpha
Helix 79	AI7	E	210	224	Right-handed alpha
Helix 80	AI8	E	238	242	Right-handed 310
Helix 81	AI9	E	273	289	Right-handed alpha
Helix 82	AJ1	E	304	310	Right-handed alpha
Helix 83	AJ2	E	321	333	Right-handed alpha
Helix 84	AJ3	E	335	337	Right-handed 310
Helix 85	AJ4	E	338	358	Right-handed alpha
Helix 86	AJ5	E	359	361	Right-handed 310
Helix 87	AJ6	F	34	40	Right-handed alpha
Helix 88	AJ7	F	43	54	Right-handed alpha
Helix 89	AJ8	F	58	71	Right-handed alpha
Helix 90	AJ9	F	76	86	Right-handed alpha
Helix 91	AK1	F	91	104	Right-handed alpha
Helix 92	AK2	F	105	107	Right-handed 310
Helix 93	AK3	F	123	148	Right-handed alpha
Helix 94	AK4	F	160	171	Right-handed alpha
Helix 95	AK5	F	175	189	Right-handed alpha
Helix 96	AK6	F	195	207	Right-handed alpha
Helix 97	AK7	F	210	224	Right-handed alpha
Helix 98	AK8	F	229	234	Right-handed alpha
Helix 99	AK9	F	273	285	Right-handed alpha
Helix 100	AL1	F	300	310	Right-handed alpha
Helix 101	AL2	F	321	333	Right-handed alpha
Helix 102	AL3	F	335	337	Right-handed 310
Helix 103	AL4	F	338	358	Right-handed alpha
Helix 104	AL5	F	359	361	Right-handed 310
Helix 105	AL6	G	34	42	Right-handed alpha
Helix 106	AL7	G	43	54	Right-handed alpha
Helix 107	AL8	G	58	70	Right-handed alpha
Helix 108	AL9	G	76	86	Right-handed alpha
Helix 109	AM1	G	91	107	Right-handed alpha
Helix 110	AM2	G	126	148	Right-handed alpha
Helix 111	AM3	G	160	171	Right-handed alpha
Helix 112	AM4	G	175	191	Right-handed alpha
Helix 113	AM5	G	195	207	Right-handed alpha
Helix 114	AM6	G	210	224	Right-handed alpha
Helix 115	AM7	G	229	234	Right-handed alpha
Helix 116	AM8	G	273	289	Right-handed alpha
Helix 117	AM9	G	301	306	Right-handed alpha
Helix 118	AN1	G	308	312	Right-handed 310
Helix 119	AN2	G	321	333	Right-handed alpha
Helix 120	AN3	G	335	337	Right-handed 310
Helix 121	AN4	G	338	361	Right-handed alpha
Helix 122	AN5	H	35	39	Right-handed alpha
Helix 123	AN6	H	43	53	Right-handed alpha
Helix 124	AN7	H	58	72	Right-handed alpha
Helix 125	AN8	H	76	86	Right-handed alpha
Helix 126	AN9	H	91	105	Right-handed alpha
Helix 127	AO1	H	123	148	Right-handed alpha
Helix 128	AO2	H	160	171	Right-handed alpha
Helix 129	AO3	H	175	189	Right-handed alpha
Helix 130	AO4	H	195	207	Right-handed alpha
Helix 131	AO5	H	210	224	Right-handed alpha
Helix 132	AO6	H	273	288	Right-handed alpha
Helix 133	AO7	H	304	309	Right-handed alpha
Helix 134	AO8	H	326	332	Right-handed alpha
Helix 135	AO9	H	335	337	Right-handed 310
Helix 136	AP1	H	338	361	Right-handed alpha
Helix 137	AP2	I	34	40	Right-handed alpha
Helix 138	AP3	I	43	53	Right-handed alpha
Helix 139	AP4	I	58	71	Right-handed alpha
Helix 140	AP5	I	76	85	Right-handed alpha
Helix 141	AP6	I	91	104	Right-handed alpha
Helix 142	AP7	I	126	149	Right-handed alpha
Helix 143	AP8	I	160	171	Right-handed alpha
Helix 144	AP9	I	175	190	Right-handed alpha
Helix 145	AQ1	I	195	207	Right-handed alpha
Helix 146	AQ2	I	210	224	Right-handed alpha
Helix 147	AQ3	I	230	234	Right-handed 310
Helix 148	AQ4	I	273	289	Right-handed alpha
Helix 149	AQ5	I	301	309	Right-handed alpha
Helix 150	AQ6	I	322	333	Right-handed alpha
Helix 151	AQ7	I	335	337	Right-handed 310
Helix 152	AQ8	I	338	358	Right-handed alpha
Helix 153	AQ9	J	34	40	Right-handed alpha
Helix 154	AR1	J	43	54	Right-handed alpha
Helix 155	AR2	J	58	72	Right-handed alpha
Helix 156	AR3	J	76	85	Right-handed alpha
Helix 157	AR4	J	91	104	Right-handed alpha
Helix 158	AR5	J	123	149	Right-handed alpha
Helix 159	AR6	J	160	171	Right-handed alpha
Helix 160	AR7	J	175	189	Right-handed alpha
Helix 161	AR8	J	195	207	Right-handed alpha
Helix 162	AR9	J	210	224	Right-handed alpha
Helix 163	AS1	J	231	235	Right-handed 310
Helix 164	AS2	J	273	289	Right-handed alpha
Helix 165	AS3	J	299	309	Right-handed alpha
Helix 166	AS4	J	310	313	Right-handed 310
Helix 167	AS5	J	321	333	Right-handed alpha
Helix 168	AS6	J	335	337	Right-handed 310
Helix 169	AS7	J	338	359	Right-handed alpha
Helix 170	AS8	K	34	40	Right-handed alpha
Helix 171	AS9	K	43	54	Right-handed alpha
Helix 172	AT1	K	58	70	Right-handed alpha
Helix 173	AT2	K	76	86	Right-handed alpha
Helix 174	AT3	K	91	104	Right-handed alpha
Helix 175	AT4	K	124	126	Right-handed 310
Helix 176	AT5	K	127	148	Right-handed alpha
Helix 177	AT6	K	160	171	Right-handed alpha
Helix 178	AT7	K	175	189	Right-handed alpha
Helix 179	AT8	K	195	207	Right-handed alpha
Helix 180	AT9	K	210	224	Right-handed alpha
Helix 181	AU1	K	273	289	Right-handed alpha
Helix 182	AU2	K	300	310	Right-handed alpha
Helix 183	AU3	K	321	333	Right-handed alpha
Helix 184	AU4	K	335	337	Right-handed 310
Helix 185	AU5	K	338	361	Right-handed alpha
Helix 186	AU6	L	34	40	Right-handed alpha
Helix 187	AU7	L	43	54	Right-handed alpha
Helix 188	AU8	L	58	72	Right-handed alpha
Helix 189	AU9	L	76	85	Right-handed alpha
Helix 190	AV1	L	91	107	Right-handed alpha
Helix 191	AV2	L	126	149	Right-handed alpha
Helix 192	AV3	L	160	171	Right-handed alpha
Helix 193	AV4	L	175	189	Right-handed alpha
Helix 194	AV5	L	195	207	Right-handed alpha
Helix 195	AV6	L	210	224	Right-handed alpha
Helix 196	AV7	L	273	289	Right-handed alpha
Helix 197	AV8	L	300	309	Right-handed alpha
Helix 198	AV9	L	321	332	Right-handed alpha
Helix 199	AW1	L	335	337	Right-handed 310
Helix 200	AW2	L	338	359	Right-handed alpha

There are 2 sheets in PDB entry 8QWB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	30	first strand
Strand 2	E	33	34	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	29	30	first strand
Strand 2	H	33	34	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8QWB

Analysis of interatomic Contacts of Structural Units in PDB entry:
8QWB