Analysis of interatomic Contacts of Structural Units in PDB entry:
8QX3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8QX3 entry

There are 2 chains in PDB entry 8QX3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 31	GLY 967
B	VAL 31	ARG 384

There are175 helices in PDB entry 8QX3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	50	Right-handed alpha
Helix 2	AA2	A	50	71	Right-handed alpha
Helix 3	AA3	A	72	85	Right-handed alpha
Helix 4	AA4	A	87	119	Right-handed alpha
Helix 5	AA5	A	138	149	Right-handed alpha
Helix 6	AA6	A	153	163	Right-handed alpha
Helix 7	AA7	A	179	197	Right-handed alpha
Helix 8	AA8	A	202	222	Right-handed alpha
Helix 9	AA9	A	232	242	Right-handed alpha
Helix 10	AB1	A	247	266	Right-handed alpha
Helix 11	AB2	A	296	326	Right-handed alpha
Helix 12	AB3	A	332	345	Right-handed alpha
Helix 13	AB4	A	365	391	Right-handed alpha
Helix 14	AB5	A	397	401	Right-handed 310
Helix 15	AB6	A	408	422	Right-handed alpha
Helix 16	AB7	A	424	429	Right-handed alpha
Helix 17	AB8	A	430	443	Right-handed alpha
Helix 18	AB9	A	455	469	Right-handed alpha
Helix 19	AC1	A	478	492	Right-handed alpha
Helix 20	AC2	A	504	520	Right-handed alpha
Helix 21	AC3	A	521	523	Right-handed 310
Helix 22	AC4	A	535	549	Right-handed alpha
Helix 23	AC5	A	563	569	Right-handed alpha
Helix 24	AC6	A	569	580	Right-handed alpha
Helix 25	AC7	A	580	587	Right-handed alpha
Helix 26	AC8	A	599	604	Right-handed alpha
Helix 27	AC9	A	605	627	Right-handed alpha
Helix 28	AD1	A	640	644	Right-handed 310
Helix 29	AD2	A	647	654	Right-handed alpha
Helix 30	AD3	A	670	678	Right-handed alpha
Helix 31	AD4	A	679	700	Right-handed alpha
Helix 32	AD5	A	706	729	Right-handed alpha
Helix 33	AD6	A	733	742	Right-handed alpha
Helix 34	AD7	A	743	751	Right-handed 310
Helix 35	AD8	A	769	780	Right-handed alpha
Helix 36	AD9	A	783	788	Right-handed alpha
Helix 37	AE1	A	789	801	Right-handed alpha
Helix 38	AE2	A	802	813	Right-handed alpha
Helix 39	AE3	A	815	831	Right-handed alpha
Helix 40	AE4	A	833	845	Right-handed alpha
Helix 41	AE5	A	849	872	Right-handed alpha
Helix 42	AE6	A	889	909	Right-handed alpha
Helix 43	AE7	A	934	939	Right-handed 310
Helix 44	AE8	A	947	963	Right-handed alpha
Helix 45	AE9	B	32	50	Right-handed alpha
Helix 46	AF1	B	50	71	Right-handed alpha
Helix 47	AF2	B	72	85	Right-handed alpha
Helix 48	AF3	B	87	119	Right-handed alpha
Helix 49	AF4	B	138	149	Right-handed alpha
Helix 50	AF5	B	153	163	Right-handed alpha
Helix 51	AF6	B	179	197	Right-handed alpha
Helix 52	AF7	B	202	222	Right-handed alpha
Helix 53	AF8	B	232	242	Right-handed alpha
Helix 54	AF9	B	247	266	Right-handed alpha
Helix 55	AG1	B	296	326	Right-handed alpha
Helix 56	AG2	B	332	345	Right-handed alpha
Helix 57	AG3	B	365	391	Right-handed alpha
Helix 58	AG4	B	397	401	Right-handed 310
Helix 59	AG5	B	408	422	Right-handed alpha
Helix 60	AG6	B	424	429	Right-handed alpha
Helix 61	AG7	B	430	443	Right-handed alpha
Helix 62	AG8	B	455	469	Right-handed alpha
Helix 63	AG9	B	478	492	Right-handed alpha
Helix 64	AH1	B	504	520	Right-handed alpha
Helix 65	AH2	B	521	523	Right-handed 310
Helix 66	AH3	B	535	549	Right-handed alpha
Helix 67	AH4	B	563	580	Right-handed alpha
Helix 68	AH5	B	580	587	Right-handed alpha
Helix 69	AH6	B	599	604	Right-handed alpha
Helix 70	AH7	B	605	627	Right-handed alpha
Helix 71	AH8	B	640	644	Right-handed 310
Helix 72	AH9	B	647	654	Right-handed alpha
Helix 73	AI1	B	670	678	Right-handed alpha
Helix 74	AI2	B	679	700	Right-handed alpha
Helix 75	AI3	B	706	729	Right-handed alpha
Helix 76	AI4	B	733	742	Right-handed alpha
Helix 77	AI5	B	743	751	Right-handed 310
Helix 78	AI6	B	769	780	Right-handed alpha
Helix 79	AI7	B	783	788	Right-handed alpha
Helix 80	AI8	B	789	801	Right-handed alpha
Helix 81	AI9	B	802	813	Right-handed alpha
Helix 82	AJ1	B	815	831	Right-handed alpha
Helix 83	AJ2	B	833	845	Right-handed alpha
Helix 84	AJ3	B	849	872	Right-handed alpha
Helix 85	AJ4	B	890	909	Right-handed alpha
Helix 86	AJ5	B	934	939	Right-handed 310
Helix 87	AJ6	B	947	963	Right-handed alpha
Helix 88	AJ7	C	36	50	Right-handed alpha
Helix 89	AJ8	C	50	71	Right-handed alpha
Helix 90	AJ9	C	72	85	Right-handed alpha
Helix 91	AK1	C	87	119	Right-handed alpha
Helix 92	AK2	C	139	149	Right-handed alpha
Helix 93	AK3	C	153	163	Right-handed alpha
Helix 94	AK4	C	179	197	Right-handed alpha
Helix 95	AK5	C	202	222	Right-handed alpha
Helix 96	AK6	C	232	242	Right-handed alpha
Helix 97	AK7	C	247	266	Right-handed alpha
Helix 98	AK8	C	296	326	Right-handed alpha
Helix 99	AK9	C	332	345	Right-handed alpha
Helix 100	AL1	C	365	391	Right-handed alpha
Helix 101	AL2	C	397	401	Right-handed 310
Helix 102	AL3	C	408	422	Right-handed alpha
Helix 103	AL4	C	424	429	Right-handed alpha
Helix 104	AL5	C	430	443	Right-handed alpha
Helix 105	AL6	C	455	469	Right-handed alpha
Helix 106	AL7	C	478	492	Right-handed alpha
Helix 107	AL8	C	504	520	Right-handed alpha
Helix 108	AL9	C	521	523	Right-handed 310
Helix 109	AM1	C	535	549	Right-handed alpha
Helix 110	AM2	C	563	569	Right-handed alpha
Helix 111	AM3	C	569	580	Right-handed alpha
Helix 112	AM4	C	580	588	Right-handed alpha
Helix 113	AM5	C	599	604	Right-handed alpha
Helix 114	AM6	C	605	628	Right-handed alpha
Helix 115	AM7	C	640	644	Right-handed 310
Helix 116	AM8	C	647	654	Right-handed alpha
Helix 117	AM9	C	670	678	Right-handed alpha
Helix 118	AN1	C	679	700	Right-handed alpha
Helix 119	AN2	C	706	729	Right-handed alpha
Helix 120	AN3	C	733	742	Right-handed alpha
Helix 121	AN4	C	743	751	Right-handed 310
Helix 122	AN5	C	769	780	Right-handed alpha
Helix 123	AN6	C	783	788	Right-handed alpha
Helix 124	AN7	C	789	801	Right-handed alpha
Helix 125	AN8	C	802	813	Right-handed alpha
Helix 126	AN9	C	815	831	Right-handed alpha
Helix 127	AO1	C	833	845	Right-handed alpha
Helix 128	AO2	C	849	872	Right-handed alpha
Helix 129	AO3	C	890	909	Right-handed alpha
Helix 130	AO4	C	934	939	Right-handed 310
Helix 131	AO5	C	947	964	Right-handed alpha
Helix 132	AO6	D	33	50	Right-handed alpha
Helix 133	AO7	D	50	71	Right-handed alpha
Helix 134	AO8	D	73	85	Right-handed alpha
Helix 135	AO9	D	87	119	Right-handed alpha
Helix 136	AP1	D	139	149	Right-handed alpha
Helix 137	AP2	D	153	163	Right-handed alpha
Helix 138	AP3	D	179	197	Right-handed alpha
Helix 139	AP4	D	202	222	Right-handed alpha
Helix 140	AP5	D	232	242	Right-handed alpha
Helix 141	AP6	D	247	266	Right-handed alpha
Helix 142	AP7	D	296	326	Right-handed alpha
Helix 143	AP8	D	332	345	Right-handed alpha
Helix 144	AP9	D	365	391	Right-handed alpha
Helix 145	AQ1	D	397	401	Right-handed 310
Helix 146	AQ2	D	408	422	Right-handed alpha
Helix 147	AQ3	D	424	429	Right-handed alpha
Helix 148	AQ4	D	430	443	Right-handed alpha
Helix 149	AQ5	D	455	469	Right-handed alpha
Helix 150	AQ6	D	478	492	Right-handed alpha
Helix 151	AQ7	D	504	520	Right-handed alpha
Helix 152	AQ8	D	521	523	Right-handed 310
Helix 153	AQ9	D	535	549	Right-handed alpha
Helix 154	AR1	D	563	569	Right-handed alpha
Helix 155	AR2	D	569	580	Right-handed alpha
Helix 156	AR3	D	580	588	Right-handed alpha
Helix 157	AR4	D	599	604	Right-handed alpha
Helix 158	AR5	D	605	627	Right-handed alpha
Helix 159	AR6	D	640	644	Right-handed 310
Helix 160	AR7	D	647	654	Right-handed alpha
Helix 161	AR8	D	670	678	Right-handed alpha
Helix 162	AR9	D	679	700	Right-handed alpha
Helix 163	AS1	D	706	729	Right-handed alpha
Helix 164	AS2	D	733	742	Right-handed alpha
Helix 165	AS3	D	743	751	Right-handed 310
Helix 166	AS4	D	769	780	Right-handed alpha
Helix 167	AS5	D	783	788	Right-handed alpha
Helix 168	AS6	D	789	801	Right-handed alpha
Helix 169	AS7	D	802	813	Right-handed alpha
Helix 170	AS8	D	815	831	Right-handed alpha
Helix 171	AS9	D	833	845	Right-handed alpha
Helix 172	AT1	D	849	872	Right-handed alpha
Helix 173	AT2	D	890	909	Right-handed alpha
Helix 174	AT3	D	934	939	Right-handed 310
Helix 175	AT4	D	947	964	Right-handed alpha

There are 4 sheets in PDB entry 8QX3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	165	171	first strand
Strand 2	A	279	283	parallel
Strand 3	A	448	454	parallel
Strand 4	A	525	531	parallel
Strand 5	A	556	561	parallel
Strand 6	A	590	596	parallel
Strand 7	A	630	636	parallel
Strand 8	A	663	669	parallel
Strand 9	A	165	171	parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	165	171	first strand
Strand 2	B	279	283	parallel
Strand 3	B	448	454	parallel
Strand 4	B	525	531	parallel
Strand 5	B	556	561	parallel
Strand 6	B	590	596	parallel
Strand 7	B	630	636	parallel
Strand 8	B	663	669	parallel
Strand 9	B	165	171	parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	165	171	first strand
Strand 2	C	279	283	parallel
Strand 3	C	448	454	parallel
Strand 4	C	525	531	parallel
Strand 5	C	557	561	parallel
Strand 6	C	590	596	parallel
Strand 7	C	630	636	parallel
Strand 8	C	663	669	parallel
Strand 9	C	165	171	parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	171	first strand
Strand 2	D	279	283	parallel
Strand 3	D	448	454	parallel
Strand 4	D	525	531	parallel
Strand 5	D	556	561	parallel
Strand 6	D	590	596	parallel
Strand 7	D	630	636	parallel
Strand 8	D	664	669	parallel
Strand 9	D	166	171	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8QX3

Analysis of interatomic Contacts of Structural Units in PDB entry:
8QX3