Analysis of interatomic Contacts of Structural Units in PDB entry:
8QZC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QZC entry

There are 2 chains in PDB entry 8QZC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 117ARG 910
B
 MET 117ARG 910
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 8QZC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
166 180Right-handed alpha
Helix 2
AA2
A
204 213Right-handed alpha
Helix 3
AA3
A
222 226Right-handed 310
Helix 4
AA4
A
237 241Right-handed 310
Helix 5
AA5
A
242 257Right-handed alpha
Helix 6
AA6
A
268 275Right-handed alpha
Helix 7
AA7
A
296 305Right-handed alpha
Helix 8
AA8
A
307 311Right-handed 310
Helix 9
AA9
A
316 358Right-handed alpha
Helix 10
AB1
A
359 362Right-handed 310
Helix 11
AB2
A
363 371Right-handed alpha
Helix 12
AB3
A
391 393Right-handed 310
Helix 13
AB4
A
394 402Right-handed alpha
Helix 14
AB5
A
403 405Right-handed 310
Helix 15
AB6
A
406 439Right-handed alpha
Helix 16
AB7
A
452 465Right-handed alpha
Helix 17
AB8
A
489 527Right-handed alpha
Helix 18
AB9
A
536 569Right-handed alpha
Helix 19
AC1
A
572 601Right-handed alpha
Helix 20
AC2
A
617 619Right-handed 310
Helix 21
AC3
A
630 651Right-handed alpha
Helix 22
AC4
A
685 693Right-handed alpha
Helix 23
AC5
A
699 716Right-handed alpha
Helix 24
AC6
A
722 744Right-handed alpha
Helix 25
AC7
A
758 782Right-handed alpha
Helix 26
AC8
A
785 795Right-handed alpha
Helix 27
AC9
A
803 809Right-handed alpha
Helix 28
AD1
A
815 817Right-handed 310
Helix 29
AD2
A
854 886Right-handed alpha
Helix 30
AD3
A
890 910Right-handed alpha
Helix 31
AD4
B
166 181Right-handed alpha
Helix 32
AD5
B
202 204Right-handed 310
Helix 33
AD6
B
205 213Right-handed alpha
Helix 34
AD7
B
222 226Right-handed 310
Helix 35
AD8
B
237 241Right-handed 310
Helix 36
AD9
B
242 257Right-handed alpha
Helix 37
AE1
B
268 275Right-handed alpha
Helix 38
AE2
B
296 305Right-handed alpha
Helix 39
AE3
B
307 311Right-handed 310
Helix 40
AE4
B
316 358Right-handed alpha
Helix 41
AE5
B
359 362Right-handed 310
Helix 42
AE6
B
363 371Right-handed alpha
Helix 43
AE7
B
391 393Right-handed 310
Helix 44
AE8
B
394 402Right-handed alpha
Helix 45
AE9
B
403 405Right-handed 310
Helix 46
AF1
B
406 439Right-handed alpha
Helix 47
AF2
B
452 465Right-handed alpha
Helix 48
AF3
B
489 527Right-handed alpha
Helix 49
AF4
B
536 569Right-handed alpha
Helix 50
AF5
B
572 601Right-handed alpha
Helix 51
AF6
B
617 619Right-handed 310
Helix 52
AF7
B
630 651Right-handed alpha
Helix 53
AF8
B
685 693Right-handed alpha
Helix 54
AF9
B
699 716Right-handed alpha
Helix 55
AG1
B
722 744Right-handed alpha
Helix 56
AG2
B
758 782Right-handed alpha
Helix 57
AG3
B
785 795Right-handed alpha
Helix 58
AG4
B
803 809Right-handed alpha
Helix 59
AG5
B
815 817Right-handed 310
Helix 60
AG6
B
854 886Right-handed alpha
Helix 61
AG7
B
890 910Right-handed alpha
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There are 10 sheets in PDB entry 8QZC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
279 281anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 190first strand
Strand 2
A
195 198anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 218first strand
Strand 2
A
229 230anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
615 616first strand
Strand 2
A
620 621anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
810 813first strand
Strand 2
A
835 838anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 126first strand
Strand 2
B
279 281anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 190first strand
Strand 2
B
195 198anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 218first strand
Strand 2
B
229 230anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
615 616first strand
Strand 2
B
620 621anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
810 813first strand
Strand 2
B
835 838anti-parallel
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