Analysis of interatomic Contacts of Structural Units in PDB entry:
8QZL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8QZL entry

There are 3 chains in PDB entry 8QZL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 1033
B	MET 1	SER 1033
C	MET 1	ARG 1031

There are129 helices in PDB entry 8QZL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	8	Right-handed alpha
Helix 2	AA2	A	8	30	Right-handed alpha
Helix 3	AA3	A	53	61	Right-handed alpha
Helix 4	AA4	A	61	68	Right-handed alpha
Helix 5	AA5	A	99	112	Right-handed alpha
Helix 6	AA6	A	113	118	Right-handed 310
Helix 7	AA7	A	119	126	Right-handed alpha
Helix 8	AA8	A	152	162	Right-handed alpha
Helix 9	AA9	A	162	169	Right-handed alpha
Helix 10	AB1	A	189	196	Right-handed alpha
Helix 11	AB2	A	199	211	Right-handed alpha
Helix 12	AB3	A	242	248	Right-handed alpha
Helix 13	AB4	A	298	312	Right-handed alpha
Helix 14	AB5	A	313	317	Right-handed 310
Helix 15	AB6	A	329	360	Right-handed alpha
Helix 16	AB7	A	361	386	Right-handed alpha
Helix 17	AB8	A	391	423	Right-handed alpha
Helix 18	AB9	A	426	437	Right-handed alpha
Helix 19	AC1	A	438	454	Right-handed alpha
Helix 20	AC2	A	455	459	Right-handed 310
Helix 21	AC3	A	463	496	Right-handed alpha
Helix 22	AC4	A	510	536	Right-handed alpha
Helix 23	AC5	A	540	558	Right-handed alpha
Helix 24	AC6	A	582	598	Right-handed alpha
Helix 25	AC7	A	632	636	Right-handed 310
Helix 26	AC8	A	642	654	Right-handed alpha
Helix 27	AC9	A	690	707	Right-handed alpha
Helix 28	AD1	A	731	739	Right-handed alpha
Helix 29	AD2	A	741	751	Right-handed alpha
Helix 30	AD3	A	781	787	Right-handed 310
Helix 31	AD4	A	835	849	Right-handed alpha
Helix 32	AD5	A	860	868	Right-handed alpha
Helix 33	AD6	A	870	892	Right-handed alpha
Helix 34	AD7	A	895	902	Right-handed alpha
Helix 35	AD8	A	903	919	Right-handed alpha
Helix 36	AD9	A	923	954	Right-handed alpha
Helix 37	AE1	A	959	986	Right-handed alpha
Helix 38	AE2	A	986	991	Right-handed alpha
Helix 39	AE3	A	995	1015	Right-handed alpha
Helix 40	AE4	A	1016	1032	Right-handed alpha
Helix 41	AE5	B	2	6	Right-handed alpha
Helix 42	AE6	B	8	28	Right-handed alpha
Helix 43	AE7	B	53	60	Right-handed alpha
Helix 44	AE8	B	61	68	Right-handed alpha
Helix 45	AE9	B	99	115	Right-handed alpha
Helix 46	AF1	B	116	118	Right-handed 310
Helix 47	AF2	B	119	126	Right-handed alpha
Helix 48	AF3	B	150	162	Right-handed alpha
Helix 49	AF4	B	162	168	Right-handed alpha
Helix 50	AF5	B	189	196	Right-handed alpha
Helix 51	AF6	B	199	211	Right-handed alpha
Helix 52	AF7	B	242	248	Right-handed alpha
Helix 53	AF8	B	263	265	Right-handed 310
Helix 54	AF9	B	298	313	Right-handed alpha
Helix 55	AG1	B	329	345	Right-handed alpha
Helix 56	AG2	B	345	359	Right-handed alpha
Helix 57	AG3	B	361	386	Right-handed alpha
Helix 58	AG4	B	391	400	Right-handed alpha
Helix 59	AG5	B	401	423	Right-handed alpha
Helix 60	AG6	B	426	454	Right-handed alpha
Helix 61	AG7	B	455	459	Right-handed 310
Helix 62	AG8	B	460	488	Right-handed alpha
Helix 63	AG9	B	488	497	Right-handed alpha
Helix 64	AH1	B	510	535	Right-handed alpha
Helix 65	AH2	B	536	558	Right-handed alpha
Helix 66	AH3	B	582	601	Right-handed alpha
Helix 67	AH4	B	632	636	Right-handed 310
Helix 68	AH5	B	638	641	Right-handed 310
Helix 69	AH6	B	642	655	Right-handed alpha
Helix 70	AH7	B	690	706	Right-handed alpha
Helix 71	AH8	B	731	738	Right-handed alpha
Helix 72	AH9	B	741	753	Right-handed alpha
Helix 73	AI1	B	776	779	Right-handed 310
Helix 74	AI2	B	781	787	Right-handed 310
Helix 75	AI3	B	800	803	Right-handed alpha
Helix 76	AI4	B	835	848	Right-handed alpha
Helix 77	AI5	B	859	869	Right-handed alpha
Helix 78	AI6	B	870	892	Right-handed alpha
Helix 79	AI7	B	896	902	Right-handed alpha
Helix 80	AI8	B	903	919	Right-handed alpha
Helix 81	AI9	B	923	955	Right-handed alpha
Helix 82	AJ1	B	958	970	Right-handed alpha
Helix 83	AJ2	B	971	985	Right-handed alpha
Helix 84	AJ3	B	986	991	Right-handed alpha
Helix 85	AJ4	B	995	1032	Right-handed alpha
Helix 86	AJ5	C	2	7	Right-handed alpha
Helix 87	AJ6	C	8	28	Right-handed alpha
Helix 88	AJ7	C	53	68	Right-handed alpha
Helix 89	AJ8	C	99	115	Right-handed alpha
Helix 90	AJ9	C	116	118	Right-handed 310
Helix 91	AK1	C	119	126	Right-handed alpha
Helix 92	AK2	C	152	162	Right-handed alpha
Helix 93	AK3	C	162	169	Right-handed alpha
Helix 94	AK4	C	189	196	Right-handed alpha
Helix 95	AK5	C	199	211	Right-handed alpha
Helix 96	AK6	C	242	248	Right-handed alpha
Helix 97	AK7	C	298	312	Right-handed alpha
Helix 98	AK8	C	313	317	Right-handed 310
Helix 99	AK9	C	329	360	Right-handed alpha
Helix 100	AL1	C	361	370	Right-handed alpha
Helix 101	AL2	C	370	387	Right-handed alpha
Helix 102	AL3	C	391	403	Right-handed alpha
Helix 103	AL4	C	405	422	Right-handed alpha
Helix 104	AL5	C	426	436	Right-handed alpha
Helix 105	AL6	C	441	446	Right-handed alpha
Helix 106	AL7	C	454	458	Right-handed 310
Helix 107	AL8	C	460	487	Right-handed alpha
Helix 108	AL9	C	487	497	Right-handed alpha
Helix 109	AM1	C	510	536	Right-handed alpha
Helix 110	AM2	C	538	558	Right-handed alpha
Helix 111	AM3	C	582	594	Right-handed alpha
Helix 112	AM4	C	596	601	Right-handed alpha
Helix 113	AM5	C	632	636	Right-handed 310
Helix 114	AM6	C	642	655	Right-handed alpha
Helix 115	AM7	C	690	706	Right-handed alpha
Helix 116	AM8	C	731	738	Right-handed alpha
Helix 117	AM9	C	741	755	Right-handed alpha
Helix 118	AN1	C	775	779	Right-handed 310
Helix 119	AN2	C	781	787	Right-handed 310
Helix 120	AN3	C	835	849	Right-handed alpha
Helix 121	AN4	C	859	871	Right-handed alpha
Helix 122	AN5	C	871	892	Right-handed alpha
Helix 123	AN6	C	895	901	Right-handed alpha
Helix 124	AN7	C	903	918	Right-handed alpha
Helix 125	AN8	C	923	954	Right-handed alpha
Helix 126	AN9	C	958	979	Right-handed alpha
Helix 127	AO1	C	985	991	Right-handed alpha
Helix 128	AO2	C	995	1016	Right-handed alpha
Helix 129	AO3	C	1016	1031	Right-handed alpha

There are 26 sheets in PDB entry 8QZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	130	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	82	anti-parallel
Strand 5	A	815	818	anti-parallel
Strand 6	A	821	823	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	177	first strand
Strand 2	A	287	293	anti-parallel
Strand 3	A	138	144	anti-parallel
Strand 4	A	321	328	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	272	first strand
Strand 2	A	182	188	anti-parallel
Strand 3	A	766	774	parallel
Strand 4	A	756	763	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	219	first strand
Strand 2	A	232	235	anti-parallel
Strand 3	B	723	730	parallel
Strand 4	B	804	811	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	253	first strand
Strand 2	A	259	261	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	278	281	first strand
Strand 2	A	605	612	anti-parallel
Strand 3	A	623	630	anti-parallel
Strand 4	A	572	576	anti-parallel
Strand 5	A	663	665	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	825	828	first strand
Strand 2	A	679	682	anti-parallel
Strand 3	A	857	859	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	804	811	first strand
Strand 2	A	723	730	anti-parallel
Strand 3	C	232	235	parallel
Strand 4	C	218	219	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	789	791	first strand
Strand 2	A	797	799	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	131	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	82	anti-parallel
Strand 5	B	815	818	anti-parallel
Strand 6	B	821	822	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	177	first strand
Strand 2	B	284	291	anti-parallel
Strand 3	B	280	281	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	177	first strand
Strand 2	B	284	291	anti-parallel
Strand 3	B	138	144	anti-parallel
Strand 4	B	321	328	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	267	272	first strand
Strand 2	B	182	188	anti-parallel
Strand 3	B	766	774	parallel
Strand 4	B	756	763	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	219	first strand
Strand 2	B	232	235	anti-parallel
Strand 3	C	723	729	parallel
Strand 4	C	805	811	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	253	first strand
Strand 2	B	259	261	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	605	609	first strand
Strand 2	B	627	630	anti-parallel
Strand 3	B	570	576	anti-parallel
Strand 4	B	619	624	anti-parallel
Strand 5	B	612	614	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	605	609	first strand
Strand 2	B	627	630	anti-parallel
Strand 3	B	570	576	anti-parallel
Strand 4	B	663	666	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	712	717	first strand
Strand 2	B	826	830	anti-parallel
Strand 3	B	679	682	anti-parallel
Strand 4	B	857	858	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	789	791	first strand
Strand 2	B	797	799	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	131	first strand
Strand 2	C	42	48	anti-parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	75	83	anti-parallel
Strand 5	C	814	818	anti-parallel
Strand 6	C	821	822	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	138	144	anti-parallel
Strand 4	C	321	328	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	278	281	anti-parallel
Strand 4	C	605	612	anti-parallel
Strand 5	C	623	630	anti-parallel
Strand 6	C	572	576	anti-parallel
Strand 7	C	661	665	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	272	first strand
Strand 2	C	182	188	anti-parallel
Strand 3	C	766	773	parallel
Strand 4	C	756	763	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	253	first strand
Strand 2	C	259	261	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	712	717	first strand
Strand 2	C	825	830	anti-parallel
Strand 3	C	679	682	anti-parallel
Strand 4	C	857	858	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	789	791	first strand
Strand 2	C	797	799	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8QZL

Analysis of interatomic Contacts of Structural Units in PDB entry:
8QZL