Analysis of interatomic Contacts of Structural Units in PDB entry:
8R0P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8R0P entry

There are 5 chains in PDB entry 8R0P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 5	ARG 286
B	ASN 5	ARG 286
C	ASN 5	ARG 286
D	ASN 5	ARG 286
E	ASN 5	ARG 286

There are 75 helices in PDB entry 8R0P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	12	Right-handed 310
Helix 2	AA2	A	15	43	Right-handed alpha
Helix 3	AA3	A	44	47	Right-handed 310
Helix 4	AA4	A	48	50	Right-handed 310
Helix 5	AA5	A	51	78	Right-handed alpha
Helix 6	AA6	A	93	118	Right-handed alpha
Helix 7	AA7	A	123	150	Right-handed alpha
Helix 8	AA8	A	151	155	Right-handed 310
Helix 9	AA9	A	156	186	Right-handed alpha
Helix 10	AB1	A	187	189	Right-handed 310
Helix 11	AB2	A	190	207	Right-handed alpha
Helix 12	AB3	A	209	216	Right-handed alpha
Helix 13	AB4	A	217	220	Right-handed 310
Helix 14	AB5	A	223	243	Right-handed alpha
Helix 15	AB6	A	247	263	Right-handed alpha
Helix 16	AB7	B	8	12	Right-handed 310
Helix 17	AB8	B	15	43	Right-handed alpha
Helix 18	AB9	B	44	47	Right-handed 310
Helix 19	AC1	B	48	50	Right-handed 310
Helix 20	AC2	B	51	78	Right-handed alpha
Helix 21	AC3	B	93	118	Right-handed alpha
Helix 22	AC4	B	123	150	Right-handed alpha
Helix 23	AC5	B	151	155	Right-handed 310
Helix 24	AC6	B	156	186	Right-handed alpha
Helix 25	AC7	B	187	189	Right-handed 310
Helix 26	AC8	B	190	207	Right-handed alpha
Helix 27	AC9	B	209	216	Right-handed alpha
Helix 28	AD1	B	217	220	Right-handed 310
Helix 29	AD2	B	223	243	Right-handed alpha
Helix 30	AD3	B	247	263	Right-handed alpha
Helix 31	AD4	C	8	12	Right-handed 310
Helix 32	AD5	C	15	43	Right-handed alpha
Helix 33	AD6	C	44	47	Right-handed 310
Helix 34	AD7	C	48	50	Right-handed 310
Helix 35	AD8	C	51	78	Right-handed alpha
Helix 36	AD9	C	93	118	Right-handed alpha
Helix 37	AE1	C	123	150	Right-handed alpha
Helix 38	AE2	C	151	155	Right-handed 310
Helix 39	AE3	C	156	186	Right-handed alpha
Helix 40	AE4	C	187	189	Right-handed 310
Helix 41	AE5	C	190	207	Right-handed alpha
Helix 42	AE6	C	209	216	Right-handed alpha
Helix 43	AE7	C	217	220	Right-handed 310
Helix 44	AE8	C	223	243	Right-handed alpha
Helix 45	AE9	C	247	263	Right-handed alpha
Helix 46	AF1	D	8	12	Right-handed 310
Helix 47	AF2	D	15	43	Right-handed alpha
Helix 48	AF3	D	44	47	Right-handed 310
Helix 49	AF4	D	48	50	Right-handed 310
Helix 50	AF5	D	51	78	Right-handed alpha
Helix 51	AF6	D	93	118	Right-handed alpha
Helix 52	AF7	D	123	150	Right-handed alpha
Helix 53	AF8	D	151	155	Right-handed 310
Helix 54	AF9	D	156	186	Right-handed alpha
Helix 55	AG1	D	187	189	Right-handed 310
Helix 56	AG2	D	190	207	Right-handed alpha
Helix 57	AG3	D	209	216	Right-handed alpha
Helix 58	AG4	D	217	220	Right-handed 310
Helix 59	AG5	D	223	243	Right-handed alpha
Helix 60	AG6	D	247	263	Right-handed alpha
Helix 61	AG7	E	8	12	Right-handed 310
Helix 62	AG8	E	15	43	Right-handed alpha
Helix 63	AG9	E	44	47	Right-handed 310
Helix 64	AH1	E	48	50	Right-handed 310
Helix 65	AH2	E	51	78	Right-handed alpha
Helix 66	AH3	E	93	118	Right-handed alpha
Helix 67	AH4	E	123	150	Right-handed alpha
Helix 68	AH5	E	151	155	Right-handed 310
Helix 69	AH6	E	156	186	Right-handed alpha
Helix 70	AH7	E	187	189	Right-handed 310
Helix 71	AH8	E	190	207	Right-handed alpha
Helix 72	AH9	E	209	216	Right-handed alpha
Helix 73	AI1	E	217	220	Right-handed 310
Helix 74	AI2	E	223	243	Right-handed alpha
Helix 75	AI3	E	247	263	Right-handed alpha

There are 10 sheets in PDB entry 8R0P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	82	first strand
Strand 2	A	87	89	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	274	first strand
Strand 2	A	277	280	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	82	first strand
Strand 2	B	87	89	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	274	first strand
Strand 2	B	277	280	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	82	first strand
Strand 2	C	87	89	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	272	274	first strand
Strand 2	C	277	280	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	80	82	first strand
Strand 2	D	87	89	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	272	274	first strand
Strand 2	D	277	280	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	80	82	first strand
Strand 2	E	87	89	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	272	274	first strand
Strand 2	E	277	280	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8R0P

Analysis of interatomic Contacts of Structural Units in PDB entry:
8R0P