Analysis of interatomic Contacts of Structural Units in PDB entry:
8R2G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8R2G entry

There are 15 chains in PDB entry 8R2G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 84	ASP 337
B	GLY 84	ASP 337
C	PRO 83	ASP 337
D	PRO 83	ASP 337
E	GLY 84	ALA 338
F	PRO 83	ILE 335
G	PRO 83	GLY 336
H	GLY 84	ASP 337
I	LYS 2404	THR 2412
J	LYS 2404	THR 2412
K	PHE 2406	PHE 2410
L	VAL 2405	THR 2412
M	PHE 2406	PHE 2410
N	VAL 2405	PHE 2410
O	PHE 2406	PRO 2409

There are 88 helices in PDB entry 8R2G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	88	96	Right-handed alpha
Helix 2	AA2	A	105	113	Right-handed alpha
Helix 3	AA3	A	131	143	Right-handed alpha
Helix 4	AA4	A	147	151	Right-handed 310
Helix 5	AA5	A	166	178	Right-handed alpha
Helix 6	AA6	A	180	187	Right-handed alpha
Helix 7	AA7	A	195	213	Right-handed alpha
Helix 8	AA8	A	226	233	Right-handed alpha
Helix 9	AA9	A	238	260	Right-handed alpha
Helix 10	AB1	A	290	297	Right-handed alpha
Helix 11	AB2	A	321	323	Right-handed 310
Helix 12	AB3	B	88	96	Right-handed alpha
Helix 13	AB4	B	105	113	Right-handed alpha
Helix 14	AB5	B	131	143	Right-handed alpha
Helix 15	AB6	B	147	151	Right-handed 310
Helix 16	AB7	B	166	177	Right-handed alpha
Helix 17	AB8	B	180	187	Right-handed alpha
Helix 18	AB9	B	195	213	Right-handed alpha
Helix 19	AC1	B	226	233	Right-handed alpha
Helix 20	AC2	B	238	260	Right-handed alpha
Helix 21	AC3	B	289	297	Right-handed alpha
Helix 22	AC4	B	321	323	Right-handed 310
Helix 23	AC5	C	88	96	Right-handed alpha
Helix 24	AC6	C	105	113	Right-handed alpha
Helix 25	AC7	C	131	143	Right-handed alpha
Helix 26	AC8	C	147	151	Right-handed 310
Helix 27	AC9	C	166	177	Right-handed alpha
Helix 28	AD1	C	180	187	Right-handed alpha
Helix 29	AD2	C	195	213	Right-handed alpha
Helix 30	AD3	C	226	233	Right-handed alpha
Helix 31	AD4	C	238	260	Right-handed alpha
Helix 32	AD5	C	292	297	Right-handed alpha
Helix 33	AD6	C	321	323	Right-handed 310
Helix 34	AD7	D	88	96	Right-handed alpha
Helix 35	AD8	D	105	113	Right-handed alpha
Helix 36	AD9	D	131	143	Right-handed alpha
Helix 37	AE1	D	147	151	Right-handed 310
Helix 38	AE2	D	166	178	Right-handed alpha
Helix 39	AE3	D	180	187	Right-handed alpha
Helix 40	AE4	D	195	213	Right-handed alpha
Helix 41	AE5	D	226	233	Right-handed alpha
Helix 42	AE6	D	238	260	Right-handed alpha
Helix 43	AE7	D	290	297	Right-handed alpha
Helix 44	AE8	D	321	323	Right-handed 310
Helix 45	AE9	E	88	96	Right-handed alpha
Helix 46	AF1	E	105	113	Right-handed alpha
Helix 47	AF2	E	131	143	Right-handed alpha
Helix 48	AF3	E	147	151	Right-handed 310
Helix 49	AF4	E	166	178	Right-handed alpha
Helix 50	AF5	E	180	187	Right-handed alpha
Helix 51	AF6	E	195	213	Right-handed alpha
Helix 52	AF7	E	226	233	Right-handed alpha
Helix 53	AF8	E	238	260	Right-handed alpha
Helix 54	AF9	E	290	297	Right-handed alpha
Helix 55	AG1	E	321	323	Right-handed 310
Helix 56	AG2	F	88	96	Right-handed alpha
Helix 57	AG3	F	105	113	Right-handed alpha
Helix 58	AG4	F	131	143	Right-handed alpha
Helix 59	AG5	F	147	151	Right-handed 310
Helix 60	AG6	F	166	178	Right-handed alpha
Helix 61	AG7	F	180	187	Right-handed alpha
Helix 62	AG8	F	195	213	Right-handed alpha
Helix 63	AG9	F	226	233	Right-handed alpha
Helix 64	AH1	F	238	260	Right-handed alpha
Helix 65	AH2	F	289	297	Right-handed alpha
Helix 66	AH3	F	321	323	Right-handed 310
Helix 67	AH4	G	88	96	Right-handed alpha
Helix 68	AH5	G	105	113	Right-handed alpha
Helix 69	AH6	G	131	143	Right-handed alpha
Helix 70	AH7	G	147	151	Right-handed 310
Helix 71	AH8	G	166	178	Right-handed alpha
Helix 72	AH9	G	180	187	Right-handed alpha
Helix 73	AI1	G	195	213	Right-handed alpha
Helix 74	AI2	G	226	233	Right-handed alpha
Helix 75	AI3	G	238	260	Right-handed alpha
Helix 76	AI4	G	290	297	Right-handed alpha
Helix 77	AI5	G	321	323	Right-handed 310
Helix 78	AI6	H	88	96	Right-handed alpha
Helix 79	AI7	H	105	113	Right-handed alpha
Helix 80	AI8	H	131	143	Right-handed alpha
Helix 81	AI9	H	147	151	Right-handed 310
Helix 82	AJ1	H	166	177	Right-handed alpha
Helix 83	AJ2	H	180	187	Right-handed alpha
Helix 84	AJ3	H	195	213	Right-handed alpha
Helix 85	AJ4	H	226	233	Right-handed alpha
Helix 86	AJ5	H	238	260	Right-handed alpha
Helix 87	AJ6	H	290	297	Right-handed alpha
Helix 88	AJ7	H	321	323	Right-handed 310

There are 16 sheets in PDB entry 8R2G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	87	first strand
Strand 2	H	188	192	anti-parallel
Strand 3	H	155	160	parallel
Strand 4	H	217	223	parallel
Strand 5	H	263	268	parallel
Strand 6	H	120	126	parallel
Strand 7	H	299	305	parallel
Strand 8	H	310	315	anti-parallel
Strand 9	H	325	331	anti-parallel
Strand 10	H	334	336	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	116	117	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	336	first strand
Strand 2	A	325	331	anti-parallel
Strand 3	A	310	315	anti-parallel
Strand 4	A	299	305	anti-parallel
Strand 5	A	120	126	parallel
Strand 6	A	263	268	parallel
Strand 7	A	217	223	parallel
Strand 8	A	155	160	parallel
Strand 9	A	188	192	parallel
Strand 10	B	86	87	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	101	first strand
Strand 2	B	116	117	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	336	first strand
Strand 2	B	325	331	anti-parallel
Strand 3	B	310	315	anti-parallel
Strand 4	B	299	305	anti-parallel
Strand 5	B	120	126	parallel
Strand 6	B	263	268	parallel
Strand 7	B	217	223	parallel
Strand 8	B	155	160	parallel
Strand 9	B	188	192	parallel
Strand 10	C	86	87	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	C	116	117	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	334	336	first strand
Strand 2	C	325	331	anti-parallel
Strand 3	C	310	315	anti-parallel
Strand 4	C	299	305	anti-parallel
Strand 5	C	120	126	parallel
Strand 6	C	263	268	parallel
Strand 7	C	217	223	parallel
Strand 8	C	155	160	parallel
Strand 9	C	188	192	parallel
Strand 10	D	86	87	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	100	101	first strand
Strand 2	D	116	117	anti-parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	334	336	first strand
Strand 2	D	325	331	anti-parallel
Strand 3	D	310	315	anti-parallel
Strand 4	D	299	305	anti-parallel
Strand 5	D	120	126	parallel
Strand 6	D	263	268	parallel
Strand 7	D	217	223	parallel
Strand 8	D	155	160	parallel
Strand 9	D	188	192	parallel
Strand 10	E	86	87	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	101	first strand
Strand 2	E	116	117	anti-parallel

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There are 10 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	334	336	first strand
Strand 2	E	325	331	anti-parallel
Strand 3	E	310	315	anti-parallel
Strand 4	E	299	305	anti-parallel
Strand 5	E	120	126	parallel
Strand 6	E	263	268	parallel
Strand 7	E	217	223	parallel
Strand 8	E	155	160	parallel
Strand 9	E	188	192	parallel
Strand 10	F	86	87	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	100	101	first strand
Strand 2	F	116	117	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	325	329	first strand
Strand 2	F	310	315	anti-parallel
Strand 3	F	299	305	anti-parallel
Strand 4	F	120	126	parallel
Strand 5	F	263	268	parallel
Strand 6	F	217	223	parallel
Strand 7	F	155	160	parallel
Strand 8	F	188	192	parallel
Strand 9	G	86	87	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	101	first strand
Strand 2	G	116	117	anti-parallel

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There are 10 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	334	336	first strand
Strand 2	G	325	331	anti-parallel
Strand 3	G	310	315	anti-parallel
Strand 4	G	299	305	anti-parallel
Strand 5	G	120	126	parallel
Strand 6	G	263	268	parallel
Strand 7	G	217	223	parallel
Strand 8	G	155	160	parallel
Strand 9	G	188	192	parallel
Strand 10	H	86	87	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	100	101	first strand
Strand 2	H	116	117	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8R2G

Analysis of interatomic Contacts of Structural Units in PDB entry:
8R2G