Analysis of interatomic Contacts of Structural Units in PDB entry:
8R2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R2H entry

There are 2 chains in PDB entry 8R2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 312PRO 1204
B
 ASP 312PRO 1204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 8R2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
313 324Right-handed alpha
Helix 2
AA2
A
326 334Right-handed alpha
Helix 3
AA3
A
334 346Right-handed alpha
Helix 4
AA4
A
353 359Right-handed alpha
Helix 5
AA5
A
370 374Right-handed 310
Helix 6
AA6
A
375 390Right-handed alpha
Helix 7
AA7
A
393 397Right-handed 310
Helix 8
AA8
A
398 402Right-handed 310
Helix 9
AA9
A
403 415Right-handed alpha
Helix 10
AB1
A
419 423Right-handed 310
Helix 11
AB2
A
425 430Right-handed alpha
Helix 12
AB3
A
433 435Right-handed 310
Helix 13
AB4
A
436 456Right-handed alpha
Helix 14
AB5
A
459 465Right-handed alpha
Helix 15
AB6
A
465 476Right-handed alpha
Helix 16
AB7
A
491 497Right-handed alpha
Helix 17
AB8
A
534 553Right-handed alpha
Helix 18
AB9
A
628 633Right-handed alpha
Helix 19
AC1
A
633 647Right-handed alpha
Helix 20
AC2
A
676 683Right-handed alpha
Helix 21
AC3
A
706 711Right-handed alpha
Helix 22
AC4
A
723 737Right-handed alpha
Helix 23
AC5
A
821 823Right-handed 310
Helix 24
AC6
A
830 845Right-handed alpha
Helix 25
AC7
A
861 868Right-handed alpha
Helix 26
AC8
A
878 891Right-handed alpha
Helix 27
AC9
A
904 908Right-handed 310
Helix 28
AD1
A
910 916Right-handed alpha
Helix 29
AD2
A
938 942Right-handed 310
Helix 30
AD3
A
945 951Right-handed alpha
Helix 31
AD4
A
963 977Right-handed alpha
Helix 32
AD5
A
993 998Right-handed alpha
Helix 33
AD6
A
1031 1040Right-handed alpha
Helix 34
AD7
A
1080 1092Right-handed alpha
Helix 35
AD8
A
1094 1100Right-handed alpha
Helix 36
AD9
A
1115 1125Right-handed alpha
Helix 37
AE1
A
1141 1154Right-handed alpha
Helix 38
AE2
A
1154 1160Right-handed alpha
Helix 39
AE3
A
1177 1185Right-handed alpha
Helix 40
AE4
A
1188 1203Right-handed alpha
Helix 41
AE5
B
313 324Right-handed alpha
Helix 42
AE6
B
326 334Right-handed alpha
Helix 43
AE7
B
334 346Right-handed alpha
Helix 44
AE8
B
353 359Right-handed alpha
Helix 45
AE9
B
366 374Right-handed 310
Helix 46
AF1
B
375 390Right-handed alpha
Helix 47
AF2
B
393 397Right-handed 310
Helix 48
AF3
B
398 402Right-handed 310
Helix 49
AF4
B
403 415Right-handed alpha
Helix 50
AF5
B
425 431Right-handed alpha
Helix 51
AF6
B
433 435Right-handed 310
Helix 52
AF7
B
436 456Right-handed alpha
Helix 53
AF8
B
459 465Right-handed alpha
Helix 54
AF9
B
465 476Right-handed alpha
Helix 55
AG1
B
491 497Right-handed alpha
Helix 56
AG2
B
501 507Right-handed 310
Helix 57
AG3
B
534 552Right-handed alpha
Helix 58
AG4
B
628 633Right-handed alpha
Helix 59
AG5
B
633 647Right-handed alpha
Helix 60
AG6
B
676 686Right-handed alpha
Helix 61
AG7
B
706 711Right-handed alpha
Helix 62
AG8
B
723 737Right-handed alpha
Helix 63
AG9
B
821 823Right-handed 310
Helix 64
AH1
B
830 845Right-handed alpha
Helix 65
AH2
B
861 868Right-handed alpha
Helix 66
AH3
B
878 891Right-handed alpha
Helix 67
AH4
B
904 908Right-handed 310
Helix 68
AH5
B
909 916Right-handed alpha
Helix 69
AH6
B
938 942Right-handed 310
Helix 70
AH7
B
945 951Right-handed alpha
Helix 71
AH8
B
963 977Right-handed alpha
Helix 72
AH9
B
993 1000Right-handed alpha
Helix 73
AI1
B
1031 1040Right-handed alpha
Helix 74
AI2
B
1080 1092Right-handed alpha
Helix 75
AI3
B
1094 1100Right-handed alpha
Helix 76
AI4
B
1115 1125Right-handed alpha
Helix 77
AI5
B
1141 1154Right-handed alpha
Helix 78
AI6
B
1154 1160Right-handed alpha
Helix 79
AI7
B
1177 1185Right-handed alpha
Helix 80
AI8
B
1188 1203Right-handed alpha
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There are 8 sheets in PDB entry 8R2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 485first strand
Strand 2
A
622 627parallel
Strand 3
A
650 656parallel
Strand 4
A
743 748parallel
Strand 5
A
714 720parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
825 829first strand
Strand 2
A
990 992anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
872 874first strand
Strand 2
A
848 852parallel
Strand 3
A
896 902parallel
Strand 4
A
925 931parallel
Strand 5
A
981 987parallel
Strand 6
A
956 959parallel
Strand 7
A
1110 1112anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1044 1047first strand
Strand 2
A
1101 1108anti-parallel
Strand 3
A
1070 1077parallel
Strand 4
A
1130 1135parallel
Strand 5
A
1162 1166parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
483 485first strand
Strand 2
B
622 627parallel
Strand 3
B
650 656parallel
Strand 4
B
743 748parallel
Strand 5
B
714 720parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
825 829first strand
Strand 2
B
990 992anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
872 874first strand
Strand 2
B
848 852parallel
Strand 3
B
896 902parallel
Strand 4
B
925 931parallel
Strand 5
B
981 987parallel
Strand 6
B
956 959parallel
Strand 7
B
1110 1112anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1044 1047first strand
Strand 2
B
1101 1108anti-parallel
Strand 3
B
1070 1077parallel
Strand 4
B
1130 1135parallel
Strand 5
B
1162 1167parallel
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