Analysis of interatomic Contacts of Structural Units in PDB entry:
8R2T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R2T entry

There are 2 chains in PDB entry 8R2T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 17TYR 464
B
 LYS 18TYR 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 8R2T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 43Right-handed alpha
Helix 2
AA2
A
67 77Right-handed alpha
Helix 3
AA3
A
79 87Right-handed alpha
Helix 4
AA4
A
109 115Right-handed alpha
Helix 5
AA5
A
125 137Right-handed alpha
Helix 6
AA6
A
180 187Right-handed alpha
Helix 7
AA7
A
206 211Right-handed alpha
Helix 8
AA8
A
216 221Right-handed alpha
Helix 9
AA9
A
264 272Right-handed alpha
Helix 10
AB1
A
276 285Right-handed alpha
Helix 11
AB2
A
314 319Right-handed alpha
Helix 12
AB3
A
326 342Right-handed alpha
Helix 13
AB4
A
347 349Right-handed 310
Helix 14
AB5
A
350 381Right-handed alpha
Helix 15
AB6
A
385 398Right-handed alpha
Helix 16
AB7
A
429 432Right-handed 310
Helix 17
AB8
A
433 442Right-handed alpha
Helix 18
AB9
A
444 456Right-handed alpha
Helix 19
AC1
A
456 461Right-handed alpha
Helix 20
AC2
B
31 43Right-handed alpha
Helix 21
AC3
B
67 77Right-handed alpha
Helix 22
AC4
B
79 87Right-handed alpha
Helix 23
AC5
B
109 115Right-handed alpha
Helix 24
AC6
B
125 137Right-handed alpha
Helix 25
AC7
B
180 187Right-handed alpha
Helix 26
AC8
B
206 211Right-handed alpha
Helix 27
AC9
B
216 221Right-handed alpha
Helix 28
AD1
B
264 272Right-handed alpha
Helix 29
AD2
B
276 285Right-handed alpha
Helix 30
AD3
B
314 319Right-handed alpha
Helix 31
AD4
B
326 342Right-handed alpha
Helix 32
AD5
B
347 349Right-handed 310
Helix 33
AD6
B
350 381Right-handed alpha
Helix 34
AD7
B
385 398Right-handed alpha
Helix 35
AD8
B
429 432Right-handed 310
Helix 36
AD9
B
433 442Right-handed alpha
Helix 37
AE1
B
444 456Right-handed alpha
Helix 38
AE2
B
456 462Right-handed alpha
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There are 8 sheets in PDB entry 8R2T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 143first strand
Strand 2
A
47 51parallel
Strand 3
A
24 28parallel
Strand 4
A
170 173parallel
Strand 5
A
310 312parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
121 124anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 108first strand
Strand 2
A
92 97anti-parallel
Strand 3
A
223 229parallel
Strand 4
A
232 240anti-parallel
Strand 5
A
243 251anti-parallel
Strand 6
A
193 205anti-parallel
Strand 7
A
290 296anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 152first strand
Strand 2
A
157 160anti-parallel
Strand 3
A
165 167anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 143first strand
Strand 2
B
47 51parallel
Strand 3
B
24 28parallel
Strand 4
B
170 173parallel
Strand 5
B
310 312parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 66first strand
Strand 2
B
121 124anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 108first strand
Strand 2
B
92 97anti-parallel
Strand 3
B
223 229parallel
Strand 4
B
232 240anti-parallel
Strand 5
B
243 251anti-parallel
Strand 6
B
197 205anti-parallel
Strand 7
B
289 293anti-parallel
Strand 8
B
262 263anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 152first strand
Strand 2
B
157 160anti-parallel
Strand 3
B
165 167anti-parallel
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