Analysis of interatomic Contacts of Structural Units in PDB entry:
8R33


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R33 entry

There are 2 chains in PDB entry 8R33 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 378ASN 877
B
 GLY 378ASN 877
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8R33. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
408 410Right-handed 310
Helix 2
AA2
A
411 430Right-handed alpha
Helix 3
AA3
A
435 455Right-handed alpha
Helix 4
AA4
A
458 474Right-handed alpha
Helix 5
AA5
A
485 498Right-handed alpha
Helix 6
AA6
A
499 518Right-handed alpha
Helix 7
AA7
A
519 533Right-handed alpha
Helix 8
AA8
A
535 555Right-handed alpha
Helix 9
AA9
A
558 567Right-handed alpha
Helix 10
AB1
A
567 572Right-handed alpha
Helix 11
AB2
A
578 596Right-handed alpha
Helix 12
AB3
A
603 614Right-handed alpha
Helix 13
AB4
A
615 617Right-handed 310
Helix 14
AB5
A
619 646Right-handed alpha
Helix 15
AB6
A
664 683Right-handed alpha
Helix 16
AB7
A
684 686Right-handed 310
Helix 17
AB8
A
687 692Right-handed alpha
Helix 18
AB9
A
693 707Right-handed alpha
Helix 19
AC1
A
712 718Right-handed alpha
Helix 20
AC2
A
720 741Right-handed alpha
Helix 21
AC3
A
741 755Right-handed alpha
Helix 22
AC4
A
758 777Right-handed alpha
Helix 23
AC5
A
778 797Right-handed alpha
Helix 24
AC6
A
801 814Right-handed alpha
Helix 25
AC7
A
824 833Right-handed alpha
Helix 26
AC8
A
843 874Right-handed alpha
Helix 27
AC9
B
408 410Right-handed 310
Helix 28
AD1
B
411 428Right-handed alpha
Helix 29
AD2
B
435 455Right-handed alpha
Helix 30
AD3
B
458 474Right-handed alpha
Helix 31
AD4
B
485 496Right-handed alpha
Helix 32
AD5
B
499 518Right-handed alpha
Helix 33
AD6
B
520 533Right-handed alpha
Helix 34
AD7
B
535 555Right-handed alpha
Helix 35
AD8
B
558 567Right-handed alpha
Helix 36
AD9
B
567 572Right-handed alpha
Helix 37
AE1
B
578 596Right-handed alpha
Helix 38
AE2
B
603 614Right-handed alpha
Helix 39
AE3
B
619 646Right-handed alpha
Helix 40
AE4
B
664 683Right-handed alpha
Helix 41
AE5
B
684 686Right-handed 310
Helix 42
AE6
B
687 692Right-handed alpha
Helix 43
AE7
B
693 698Right-handed alpha
Helix 44
AE8
B
698 707Right-handed alpha
Helix 45
AE9
B
712 718Right-handed alpha
Helix 46
AF1
B
720 741Right-handed alpha
Helix 47
AF2
B
741 755Right-handed alpha
Helix 48
AF3
B
758 777Right-handed alpha
Helix 49
AF4
B
778 797Right-handed alpha
Helix 50
AF5
B
801 814Right-handed alpha
Helix 51
AF6
B
824 831Right-handed alpha
Helix 52
AF7
B
843 874Right-handed alpha
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There are 2 sheets in PDB entry 8R33. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 387first strand
Strand 2
A
403 406anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
384 387first strand
Strand 2
B
403 406anti-parallel
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