Analysis of interatomic Contacts of Structural Units in PDB entry:
8R35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R35 entry

There are 2 chains in PDB entry 8R35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 407ASN 877
B
 GLY 378ASN 877
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8R35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
411 430Right-handed alpha
Helix 2
AA2
A
435 455Right-handed alpha
Helix 3
AA3
A
458 474Right-handed alpha
Helix 4
AA4
A
485 498Right-handed alpha
Helix 5
AA5
A
499 518Right-handed alpha
Helix 6
AA6
A
520 533Right-handed alpha
Helix 7
AA7
A
535 567Right-handed alpha
Helix 8
AA8
A
567 572Right-handed alpha
Helix 9
AA9
A
578 596Right-handed alpha
Helix 10
AB1
A
603 614Right-handed alpha
Helix 11
AB2
A
619 646Right-handed alpha
Helix 12
AB3
A
664 683Right-handed alpha
Helix 13
AB4
A
684 686Right-handed 310
Helix 14
AB5
A
687 692Right-handed alpha
Helix 15
AB6
A
693 698Right-handed alpha
Helix 16
AB7
A
699 707Right-handed alpha
Helix 17
AB8
A
712 718Right-handed alpha
Helix 18
AB9
A
720 741Right-handed alpha
Helix 19
AC1
A
741 754Right-handed alpha
Helix 20
AC2
A
758 777Right-handed alpha
Helix 21
AC3
A
778 797Right-handed alpha
Helix 22
AC4
A
801 814Right-handed alpha
Helix 23
AC5
A
824 832Right-handed alpha
Helix 24
AC6
A
843 874Right-handed alpha
Helix 25
AC7
B
406 410Right-handed 310
Helix 26
AC8
B
411 430Right-handed alpha
Helix 27
AC9
B
435 455Right-handed alpha
Helix 28
AD1
B
458 474Right-handed alpha
Helix 29
AD2
B
485 496Right-handed alpha
Helix 30
AD3
B
499 518Right-handed alpha
Helix 31
AD4
B
520 533Right-handed alpha
Helix 32
AD5
B
535 552Right-handed alpha
Helix 33
AD6
B
554 567Right-handed alpha
Helix 34
AD7
B
567 574Right-handed alpha
Helix 35
AD8
B
584 586Right-handed 310
Helix 36
AD9
B
587 594Right-handed alpha
Helix 37
AE1
B
595 598Right-handed 310
Helix 38
AE2
B
603 614Right-handed alpha
Helix 39
AE3
B
615 617Right-handed 310
Helix 40
AE4
B
619 626Right-handed alpha
Helix 41
AE5
B
626 647Right-handed alpha
Helix 42
AE6
B
664 683Right-handed alpha
Helix 43
AE7
B
687 692Right-handed alpha
Helix 44
AE8
B
693 698Right-handed alpha
Helix 45
AE9
B
698 707Right-handed alpha
Helix 46
AF1
B
712 719Right-handed alpha
Helix 47
AF2
B
720 741Right-handed alpha
Helix 48
AF3
B
741 754Right-handed alpha
Helix 49
AF4
B
758 777Right-handed alpha
Helix 50
AF5
B
778 797Right-handed alpha
Helix 51
AF6
B
801 815Right-handed alpha
Helix 52
AF7
B
824 832Right-handed alpha
Helix 53
AF8
B
843 864Right-handed alpha
Helix 54
AF9
B
864 874Right-handed alpha
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There are no sheets in PDB entry 8R35
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il