Analysis of interatomic Contacts of Structural Units in PDB entry:
8R3H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8R3H entry

There are 19 chains in PDB entry 8R3H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	THR 5	GLU 72
F	GLY 74	ARG 372
G	THR 5	GLU 72
G	GLY 74	ARG 372
H	THR 5	GLU 72
H	GLY 74	ARG 372
I	THR 5	GLU 72
I	GLY 74	ARG 372
J	THR 5	GLU 72
J	GLY 74	ARG 372
X	ALA 2	TRP 3
X	ALA 5	ALA 5
X	CYS 7	CYS 7
Y	ALA 2	TRP 3
Y	ALA 5	ALA 5
Y	CYS 7	CYS 7
Z	ALA 2	TRP 3
Z	ALA 5	ALA 5
Z	CYS 7	CYS 7

There are109 helices in PDB entry 8R3H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	55	61	Right-handed alpha
Helix 2	AA2	F	78	92	Right-handed alpha
Helix 3	AA3	F	97	101	Right-handed 310
Helix 4	AA4	F	112	126	Right-handed alpha
Helix 5	AA5	F	137	146	Right-handed alpha
Helix 6	AA6	F	172	175	Right-handed 310
Helix 7	AA7	F	181	195	Right-handed alpha
Helix 8	AA8	F	202	217	Right-handed alpha
Helix 9	AA9	F	222	233	Right-handed alpha
Helix 10	AB1	F	252	257	Right-handed alpha
Helix 11	AB2	F	258	262	Right-handed 310
Helix 12	AB3	F	263	268	Right-handed 310
Helix 13	AB4	F	273	284	Right-handed alpha
Helix 14	AB5	F	289	295	Right-handed alpha
Helix 15	AB6	F	301	306	Right-handed 310
Helix 16	AB7	F	308	321	Right-handed alpha
Helix 17	AB8	F	334	336	Right-handed 310
Helix 18	AB9	F	337	349	Right-handed alpha
Helix 19	AC1	F	350	353	Right-handed 310
Helix 20	AC2	F	359	366	Right-handed alpha
Helix 21	AC3	F	367	372	Right-handed 310
Helix 22	AC4	G	55	61	Right-handed alpha
Helix 23	AC5	G	78	92	Right-handed alpha
Helix 24	AC6	G	97	101	Right-handed 310
Helix 25	AC7	G	112	126	Right-handed alpha
Helix 26	AC8	G	137	146	Right-handed alpha
Helix 27	AC9	G	172	175	Right-handed 310
Helix 28	AD1	G	181	194	Right-handed alpha
Helix 29	AD2	G	195	197	Right-handed 310
Helix 30	AD3	G	202	217	Right-handed alpha
Helix 31	AD4	G	222	233	Right-handed alpha
Helix 32	AD5	G	252	260	Right-handed alpha
Helix 33	AD6	G	261	262	Right-handed 310
Helix 34	AD7	G	263	268	Right-handed 310
Helix 35	AD8	G	273	285	Right-handed alpha
Helix 36	AD9	G	289	295	Right-handed alpha
Helix 37	AE1	G	301	306	Right-handed 310
Helix 38	AE2	G	308	321	Right-handed alpha
Helix 39	AE3	G	334	336	Right-handed 310
Helix 40	AE4	G	337	348	Right-handed alpha
Helix 41	AE5	G	350	355	Right-handed 310
Helix 42	AE6	G	359	366	Right-handed alpha
Helix 43	AE7	G	367	372	Right-handed 310
Helix 44	AE8	H	55	61	Right-handed alpha
Helix 45	AE9	H	78	92	Right-handed alpha
Helix 46	AF1	H	97	101	Right-handed 310
Helix 47	AF2	H	112	126	Right-handed alpha
Helix 48	AF3	H	137	146	Right-handed alpha
Helix 49	AF4	H	172	175	Right-handed 310
Helix 50	AF5	H	181	194	Right-handed alpha
Helix 51	AF6	H	195	197	Right-handed 310
Helix 52	AF7	H	202	217	Right-handed alpha
Helix 53	AF8	H	222	233	Right-handed alpha
Helix 54	AF9	H	252	257	Right-handed alpha
Helix 55	AG1	H	258	262	Right-handed 310
Helix 56	AG2	H	263	268	Right-handed 310
Helix 57	AG3	H	273	284	Right-handed alpha
Helix 58	AG4	H	289	296	Right-handed alpha
Helix 59	AG5	H	301	306	Right-handed 310
Helix 60	AG6	H	308	321	Right-handed alpha
Helix 61	AG7	H	334	336	Right-handed 310
Helix 62	AG8	H	337	349	Right-handed alpha
Helix 63	AG9	H	359	366	Right-handed alpha
Helix 64	AH1	H	367	372	Right-handed 310
Helix 65	AH2	I	44	48	Right-handed 310
Helix 66	AH3	I	55	61	Right-handed alpha
Helix 67	AH4	I	78	92	Right-handed alpha
Helix 68	AH5	I	97	101	Right-handed 310
Helix 69	AH6	I	112	126	Right-handed alpha
Helix 70	AH7	I	137	145	Right-handed alpha
Helix 71	AH8	I	172	175	Right-handed 310
Helix 72	AH9	I	181	193	Right-handed alpha
Helix 73	AI1	I	194	197	Right-handed 310
Helix 74	AI2	I	202	217	Right-handed alpha
Helix 75	AI3	I	222	233	Right-handed alpha
Helix 76	AI4	I	252	257	Right-handed alpha
Helix 77	AI5	I	258	262	Right-handed 310
Helix 78	AI6	I	263	268	Right-handed 310
Helix 79	AI7	I	273	284	Right-handed alpha
Helix 80	AI8	I	285	288	Right-handed 310
Helix 81	AI9	I	289	295	Right-handed alpha
Helix 82	AJ1	I	301	306	Right-handed 310
Helix 83	AJ2	I	308	321	Right-handed alpha
Helix 84	AJ3	I	334	336	Right-handed 310
Helix 85	AJ4	I	337	349	Right-handed alpha
Helix 86	AJ5	I	350	356	Right-handed 310
Helix 87	AJ6	I	359	366	Right-handed alpha
Helix 88	AJ7	I	367	372	Right-handed 310
Helix 89	AJ8	J	55	61	Right-handed alpha
Helix 90	AJ9	J	78	92	Right-handed alpha
Helix 91	AK1	J	97	101	Right-handed 310
Helix 92	AK2	J	112	126	Right-handed alpha
Helix 93	AK3	J	137	146	Right-handed alpha
Helix 94	AK4	J	172	175	Right-handed 310
Helix 95	AK5	J	181	195	Right-handed alpha
Helix 96	AK6	J	202	217	Right-handed alpha
Helix 97	AK7	J	222	233	Right-handed alpha
Helix 98	AK8	J	252	257	Right-handed alpha
Helix 99	AK9	J	258	262	Right-handed 310
Helix 100	AL1	J	263	268	Right-handed 310
Helix 101	AL2	J	273	284	Right-handed alpha
Helix 102	AL3	J	289	295	Right-handed alpha
Helix 103	AL4	J	301	306	Right-handed 310
Helix 104	AL5	J	308	321	Right-handed alpha
Helix 105	AL6	J	334	336	Right-handed 310
Helix 106	AL7	J	337	349	Right-handed alpha
Helix 107	AL8	J	350	353	Right-handed 310
Helix 108	AL9	J	359	366	Right-handed alpha
Helix 109	AM1	J	367	372	Right-handed 310

There are 30 sheets in PDB entry 8R3H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	32	first strand
Strand 2	F	16	21	anti-parallel
Strand 3	F	8	12	anti-parallel
Strand 4	F	103	107	parallel
Strand 5	F	131	136	parallel
Strand 6	F	357	358	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	54	first strand
Strand 2	F	35	38	anti-parallel
Strand 3	F	65	68	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	72	first strand
Strand 2	F	75	76	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	176	178	first strand
Strand 2	F	160	166	anti-parallel
Strand 3	F	150	155	anti-parallel
Strand 4	F	297	300	parallel
Strand 5	F	329	330	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	176	178	first strand
Strand 2	F	160	166	anti-parallel
Strand 3	F	169	170	anti-parallel
Strand 4	J	41	42	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	238	241	first strand
Strand 2	F	247	250	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	32	first strand
Strand 2	G	16	21	anti-parallel
Strand 3	G	8	12	anti-parallel
Strand 4	G	103	107	parallel
Strand 5	G	131	136	parallel
Strand 6	G	357	358	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	35	38	anti-parallel
Strand 3	G	65	68	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	71	72	first strand
Strand 2	G	75	76	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	170	first strand
Strand 2	G	160	166	anti-parallel
Strand 3	G	176	178	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	170	first strand
Strand 2	G	160	166	anti-parallel
Strand 3	G	150	155	anti-parallel
Strand 4	G	297	300	parallel
Strand 5	G	329	330	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	238	241	first strand
Strand 2	G	247	250	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	29	32	first strand
Strand 2	H	16	21	anti-parallel
Strand 3	H	8	12	anti-parallel
Strand 4	H	103	107	parallel
Strand 5	H	131	136	parallel
Strand 6	H	357	358	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	54	first strand
Strand 2	H	35	38	anti-parallel
Strand 3	H	65	68	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	71	72	first strand
Strand 2	H	75	76	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	169	170	first strand
Strand 2	H	160	166	anti-parallel
Strand 3	H	176	178	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	169	170	first strand
Strand 2	H	160	166	anti-parallel
Strand 3	H	150	155	anti-parallel
Strand 4	H	297	300	parallel
Strand 5	H	329	330	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	238	241	first strand
Strand 2	H	247	250	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	29	32	first strand
Strand 2	I	16	21	anti-parallel
Strand 3	I	8	12	anti-parallel
Strand 4	I	103	107	parallel
Strand 5	I	131	136	parallel
Strand 6	I	357	358	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	54	first strand
Strand 2	I	35	38	anti-parallel
Strand 3	I	65	68	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	71	72	first strand
Strand 2	I	75	76	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	169	170	first strand
Strand 2	I	160	166	anti-parallel
Strand 3	I	176	178	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	169	170	first strand
Strand 2	I	160	166	anti-parallel
Strand 3	I	150	155	anti-parallel
Strand 4	I	297	300	parallel
Strand 5	I	329	330	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	238	241	first strand
Strand 2	I	247	250	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	29	32	first strand
Strand 2	J	16	21	anti-parallel
Strand 3	J	8	12	anti-parallel
Strand 4	J	103	107	parallel
Strand 5	J	131	136	parallel
Strand 6	J	357	358	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	53	54	first strand
Strand 2	J	35	38	anti-parallel
Strand 3	J	65	68	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	71	72	first strand
Strand 2	J	75	76	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	169	170	first strand
Strand 2	J	160	166	anti-parallel
Strand 3	J	176	178	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	169	170	first strand
Strand 2	J	160	166	anti-parallel
Strand 3	J	150	155	anti-parallel
Strand 4	J	297	300	parallel
Strand 5	J	329	330	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	238	241	first strand
Strand 2	J	247	250	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8R3H

Analysis of interatomic Contacts of Structural Units in PDB entry:
8R3H