Analysis of interatomic Contacts of Structural Units in PDB entry:
8R3T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R3T entry

There are 6 chains in PDB entry 8R3T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 273LYS 331
B
 GLY 273LYS 331
C
 GLY 273LYS 331
D
 GLY 273LYS 331
E
 GLY 273LYS 331
F
 GLY 273LYS 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8R3T

There are 5 sheets in PDB entry 8R3T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 290first strand
Strand 2
F
275 291parallel
Strand 3
B
274 291parallel
Strand 4
C
274 291parallel
Strand 5
D
274 291parallel
Strand 6
E
274 291parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
F
294 296parallel
Strand 3
B
294 296parallel
Strand 4
C
294 296parallel
Strand 5
D
294 296parallel
Strand 6
E
294 296parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 309first strand
Strand 2
F
305 309parallel
Strand 3
B
305 309parallel
Strand 4
C
305 309parallel
Strand 5
D
305 309parallel
Strand 6
E
305 309parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 322first strand
Strand 2
F
317 322parallel
Strand 3
B
317 322parallel
Strand 4
C
317 322parallel
Strand 5
D
317 322parallel
Strand 6
E
317 322parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 330first strand
Strand 2
F
325 330parallel
Strand 3
B
325 330parallel
Strand 4
C
325 330parallel
Strand 5
D
325 330parallel
Strand 6
E
325 330parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il