Analysis of interatomic Contacts of Structural Units in PDB entry:
8R3Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R3Z entry

There are 2 chains in PDB entry 8R3Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 27LEU 817
B
 U 1 U 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8R3Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 72Right-handed alpha
Helix 2
AA2
A
118 133Right-handed alpha
Helix 3
AA3
A
154 165Right-handed alpha
Helix 4
AA4
A
219 230Right-handed alpha
Helix 5
AA5
A
232 241Right-handed alpha
Helix 6
AA6
A
283 291Right-handed alpha
Helix 7
AA7
A
326 328Right-handed 310
Helix 8
AA8
A
336 340Right-handed 310
Helix 9
AA9
A
342 354Right-handed alpha
Helix 10
AB1
A
356 369Right-handed alpha
Helix 11
AB2
A
370 380Right-handed alpha
Helix 12
AB3
A
417 424Right-handed alpha
Helix 13
AB4
A
445 463Right-handed alpha
Helix 14
AB5
A
479 488Right-handed alpha
Helix 15
AB6
A
488 493Right-handed alpha
Helix 16
AB7
A
508 522Right-handed alpha
Helix 17
AB8
A
532 537Right-handed alpha
Helix 18
AB9
A
540 556Right-handed alpha
Helix 19
AC1
A
627 644Right-handed alpha
Helix 20
AC2
A
661 680Right-handed alpha
Helix 21
AC3
A
680 685Right-handed alpha
Helix 22
AC4
A
760 773Right-handed alpha
Helix 23
AC5
A
785 801Right-handed alpha
Helix 24
AC6
A
807 812Right-handed alpha
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There are 9 sheets in PDB entry 8R3Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 392first strand
Strand 2
A
28 31anti-parallel
Strand 3
A
703 706anti-parallel
Strand 4
A
712 713anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
141 143anti-parallel
Strand 3
A
175 187anti-parallel
Strand 4
A
203 218anti-parallel
Strand 5
A
330 333anti-parallel
Strand 6
A
244 247anti-parallel
Strand 7
A
252 255anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 170first strand
Strand 2
A
175 187anti-parallel
Strand 3
A
203 218anti-parallel
Strand 4
A
33 38anti-parallel
Strand 5
A
382 384anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
82 85anti-parallel
Strand 3
A
42 47anti-parallel
Strand 4
A
108 114anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
104 105anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 260first strand
Strand 2
A
302 305anti-parallel
Strand 3
A
323 325anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 395first strand
Strand 2
A
719 722anti-parallel
Strand 3
A
731 736anti-parallel
Strand 4
A
748 755anti-parallel
Strand 5
A
689 696anti-parallel
Strand 6
A
649 652parallel
Strand 7
A
579 587parallel
Strand 8
A
597 603anti-parallel
Strand 9
A
611 616anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 409first strand
Strand 2
A
400 402anti-parallel
Strand 3
A
569 570anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 475first strand
Strand 2
A
436 440parallel
Strand 3
A
499 504parallel
Strand 4
A
526 531parallel
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