Analysis of interatomic Contacts of Structural Units in PDB entry:
8R47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R47 entry

There are 6 chains in PDB entry 8R47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 13THR 106
B
 PRO 13THR 106
C
 PRO 13THR 106
D
 PRO 13THR 106
E
 PRO 13THR 106
F
 PRO 13THR 106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8R47

There are 8 sheets in PDB entry 8R47. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 22first strand
Strand 2
B
16 22parallel
Strand 3
C
16 22parallel
Strand 4
D
16 22parallel
Strand 5
E
16 22parallel
Strand 6
F
16 22parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 31first strand
Strand 2
B
26 31parallel
Strand 3
C
26 31parallel
Strand 4
D
26 31parallel
Strand 5
E
26 31parallel
Strand 6
F
26 31parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
B
34 37parallel
Strand 3
C
34 37parallel
Strand 4
D
34 37parallel
Strand 5
E
34 37parallel
Strand 6
F
34 37parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
B
44 48parallel
Strand 3
C
44 48parallel
Strand 4
D
44 48parallel
Strand 5
E
44 48parallel
Strand 6
F
44 48parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
B
69 74parallel
Strand 3
C
69 74parallel
Strand 4
D
69 74parallel
Strand 5
E
69 74parallel
Strand 6
F
69 74parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
B
84 86parallel
Strand 3
C
84 86parallel
Strand 4
D
84 86parallel
Strand 5
E
84 86parallel
Strand 6
F
84 86parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
B
98 99parallel
Strand 3
C
98 99parallel
Strand 4
D
98 99parallel
Strand 5
E
98 99parallel
Strand 6
F
98 99parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
B
104 105parallel
Strand 3
C
104 105parallel
Strand 4
D
104 105parallel
Strand 5
E
104 105parallel
Strand 6
F
104 105parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il