Analysis of interatomic Contacts of Structural Units in PDB entry:
8R4A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R4A entry

There are 9 chains in PDB entry 8R4A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1VAL 130
B
 LYS 1VAL 130
C
 LYS 1VAL 130
D
 LYS 1VAL 130
E
 LYS 1VAL 130
F
 LYS 1VAL 130
G
 LYS 1VAL 130
H
 LYS 1VAL 130
I
 LYS 1VAL 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8R4A

There are 10 sheets in PDB entry 8R4A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
B
23 24parallel
Strand 3
C
23 24parallel
Strand 4
D
23 24parallel
Strand 5
E
23 24parallel
Strand 6
F
23 24parallel
Strand 7
G
23 24parallel
Strand 8
H
23 24parallel
Strand 9
I
23 24parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
B
34 35parallel
Strand 3
C
34 35parallel
Strand 4
D
34 35parallel
Strand 5
E
34 35parallel
Strand 6
F
34 35parallel
Strand 7
G
34 35parallel
Strand 8
H
34 35parallel
Strand 9
I
34 35parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
B
45 46parallel
Strand 3
C
45 46parallel
Strand 4
D
45 46parallel
Strand 5
E
45 46parallel
Strand 6
F
45 46parallel
Strand 7
G
45 46parallel
Strand 8
H
45 46parallel
Strand 9
I
45 46parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
B
54 56parallel
Strand 3
C
54 56parallel
Strand 4
D
54 56parallel
Strand 5
E
54 56parallel
Strand 6
F
54 56parallel
Strand 7
G
54 56parallel
Strand 8
H
54 56parallel
Strand 9
I
54 56parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 66first strand
Strand 2
B
59 66parallel
Strand 3
C
59 66parallel
Strand 4
D
59 66parallel
Strand 5
E
59 66parallel
Strand 6
F
59 66parallel
Strand 7
G
59 66parallel
Strand 8
H
59 66parallel
Strand 9
I
59 66parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
B
74 79parallel
Strand 3
C
74 79parallel
Strand 4
D
74 79parallel
Strand 5
E
74 79parallel
Strand 6
F
74 79parallel
Strand 7
G
74 79parallel
Strand 8
H
74 79parallel
Strand 9
I
74 79parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
B
89 90parallel
Strand 3
C
89 90parallel
Strand 4
D
89 90parallel
Strand 5
E
89 90parallel
Strand 6
F
89 90parallel
Strand 7
G
89 90parallel
Strand 8
H
89 90parallel
Strand 9
I
89 90parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
B
98 99parallel
Strand 3
C
98 99parallel
Strand 4
D
98 99parallel
Strand 5
E
98 99parallel
Strand 6
F
98 99parallel
Strand 7
G
98 99parallel
Strand 8
H
98 99parallel
Strand 9
I
98 99parallel
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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
B
120 121parallel
Strand 3
C
120 121parallel
Strand 4
D
120 121parallel
Strand 5
E
120 121parallel
Strand 6
F
120 121parallel
Strand 7
G
120 121parallel
Strand 8
H
120 121parallel
Strand 9
I
120 121parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
B
124 126parallel
Strand 3
C
124 126parallel
Strand 4
D
124 126parallel
Strand 5
E
124 126parallel
Strand 6
F
124 126parallel
Strand 7
G
124 126parallel
Strand 8
H
124 126parallel
Strand 9
I
124 126parallel
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