Analysis of interatomic Contacts of Structural Units in PDB entry:
8R5G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8R5G entry

There are 12 chains in PDB entry 8R5G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 2	GLN 269
C	ALA 2	THR 142
G	ALA 2	ASP 276
M	SER 2	LEU 87
N	ALA 2	GLN 583
S	ILE 5	ASP 152
Z	SER 16	LEU 302
Y	SER 16	LEU 302
X	ALA 2	THR 142
W	SER 2	LEU 87
V	ALA 2	GLN 583
U	PRO 9	ASP 152

There are 67 helices in PDB entry 8R5G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	55	Right-handed alpha
Helix 2	AA2	A	154	159	Right-handed alpha
Helix 3	AA3	A	195	198	Right-handed 310
Helix 4	AA4	C	4	8	Right-handed 310
Helix 5	AA5	C	11	13	Right-handed 310
Helix 6	AA6	C	82	88	Right-handed 310
Helix 7	AA7	G	5	24	Right-handed alpha
Helix 8	AA8	G	25	32	Right-handed alpha
Helix 9	AA9	G	36	47	Right-handed alpha
Helix 10	AB1	G	86	88	Right-handed 310
Helix 11	AB2	G	154	158	Right-handed 310
Helix 12	AB3	G	194	213	Right-handed alpha
Helix 13	AB4	G	215	221	Right-handed alpha
Helix 14	AB5	M	51	55	Right-handed 310
Helix 15	AB6	M	60	65	Right-handed alpha
Helix 16	AB7	N	55	63	Right-handed alpha
Helix 17	AB8	N	66	78	Right-handed alpha
Helix 18	AB9	N	114	117	Right-handed 310
Helix 19	AC1	N	202	213	Right-handed alpha
Helix 20	AC2	N	229	233	Right-handed 310
Helix 21	AC3	N	250	260	Right-handed alpha
Helix 22	AC4	N	320	326	Right-handed alpha
Helix 23	AC5	N	341	359	Right-handed alpha
Helix 24	AC6	N	373	384	Right-handed alpha
Helix 25	AC7	N	401	403	Right-handed 310
Helix 26	AC8	N	409	424	Right-handed alpha
Helix 27	AC9	N	445	455	Right-handed alpha
Helix 28	AD1	N	485	490	Right-handed alpha
Helix 29	AD2	N	490	513	Right-handed alpha
Helix 30	AD3	N	521	539	Right-handed alpha
Helix 31	AD4	S	18	29	Right-handed alpha
Helix 32	AD5	S	77	84	Right-handed alpha
Helix 33	AD6	Z	35	40	Right-handed alpha
Helix 34	AD7	Z	42	46	Right-handed 310
Helix 35	AD8	Z	48	56	Right-handed alpha
Helix 36	AD9	Z	71	90	Right-handed alpha
Helix 37	AE1	Z	107	112	Right-handed alpha
Helix 38	AE2	Z	220	242	Right-handed alpha
Helix 39	AE3	Z	273	296	Right-handed alpha
Helix 40	AE4	Y	35	40	Right-handed alpha
Helix 41	AE5	Y	42	46	Right-handed 310
Helix 42	AE6	Y	48	56	Right-handed alpha
Helix 43	AE7	Y	71	90	Right-handed alpha
Helix 44	AE8	Y	107	112	Right-handed alpha
Helix 45	AE9	Y	220	241	Right-handed alpha
Helix 46	AF1	Y	273	296	Right-handed alpha
Helix 47	AF2	X	72	77	Right-handed alpha
Helix 48	AF3	X	82	88	Right-handed 310
Helix 49	AF4	W	51	57	Right-handed alpha
Helix 50	AF5	V	55	63	Right-handed alpha
Helix 51	AF6	V	66	76	Right-handed alpha
Helix 52	AF7	V	113	118	Right-handed 310
Helix 53	AF8	V	197	201	Right-handed 310
Helix 54	AF9	V	202	213	Right-handed alpha
Helix 55	AG1	V	229	233	Right-handed 310
Helix 56	AG2	V	250	259	Right-handed alpha
Helix 57	AG3	V	320	326	Right-handed alpha
Helix 58	AG4	V	341	358	Right-handed alpha
Helix 59	AG5	V	374	384	Right-handed alpha
Helix 60	AG6	V	409	424	Right-handed alpha
Helix 61	AG7	V	445	456	Right-handed alpha
Helix 62	AG8	V	485	490	Right-handed alpha
Helix 63	AG9	V	490	513	Right-handed alpha
Helix 64	AH1	V	521	539	Right-handed alpha
Helix 65	AH2	V	546	550	Right-handed 310
Helix 66	AH3	U	18	29	Right-handed alpha
Helix 67	AH4	U	77	84	Right-handed alpha

There are 46 sheets in PDB entry 8R5G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	178	first strand
Strand 2	A	168	174	anti-parallel
Strand 3	A	201	218	anti-parallel
Strand 4	A	241	246	anti-parallel
Strand 5	A	119	123	anti-parallel
Strand 6	A	94	104	anti-parallel
Strand 7	A	56	61	anti-parallel
Strand 8	A	135	150	anti-parallel
Strand 9	A	201	218	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	65	first strand
Strand 2	A	88	90	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	109	first strand
Strand 2	A	114	116	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	161	first strand
Strand 2	A	190	193	anti-parallel
Strand 3	A	184	187	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	226	first strand
Strand 2	A	234	238	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	22	23	first strand
Strand 2	C	15	19	anti-parallel
Strand 3	C	91	97	anti-parallel
Strand 4	C	103	118	anti-parallel
Strand 5	C	126	132	anti-parallel
Strand 6	C	58	66	anti-parallel
Strand 7	C	27	35	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	22	23	first strand
Strand 2	C	15	19	anti-parallel
Strand 3	C	91	97	anti-parallel
Strand 4	C	103	118	anti-parallel
Strand 5	C	135	137	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	41	first strand
Strand 2	C	51	53	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	60	first strand
Strand 2	G	72	76	parallel
Strand 3	G	175	191	anti-parallel
Strand 4	G	90	94	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	80	82	first strand
Strand 2	G	175	191	anti-parallel
Strand 3	G	247	261	anti-parallel
Strand 4	G	223	229	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	107	first strand
Strand 2	G	161	171	anti-parallel
Strand 3	G	126	129	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	109	110	first strand
Strand 2	G	114	118	anti-parallel
Strand 3	G	146	150	anti-parallel
Strand 4	G	141	143	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	132	133	first strand
Strand 2	N	551	555	anti-parallel
Strand 3	N	558	562	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	233	236	first strand
Strand 2	G	243	245	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	48	49	first strand
Strand 2	M	3	19	anti-parallel
Strand 3	M	69	84	anti-parallel
Strand 4	W	70	85	anti-parallel
Strand 5	W	3	18	anti-parallel
Strand 6	W	47	49	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	25	29	first strand
Strand 2	M	35	39	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	51	53	first strand
Strand 2	N	86	91	anti-parallel
Strand 3	N	35	40	parallel
Strand 4	N	334	337	parallel
Strand 5	N	363	367	parallel
Strand 6	N	389	392	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	97	102	first strand
Strand 2	N	105	112	anti-parallel
Strand 3	N	265	269	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	143	150	first strand
Strand 2	N	131	138	anti-parallel
Strand 3	N	119	126	anti-parallel
Strand 4	N	303	307	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	216	220	first strand
Strand 2	N	152	158	anti-parallel
Strand 3	N	246	249	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	188	194	first strand
Strand 2	N	180	185	anti-parallel
Strand 3	N	165	168	anti-parallel
Strand 4	N	239	240	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	405	408	first strand
Strand 2	N	396	399	anti-parallel
Strand 3	N	439	440	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	434	435	first strand
Strand 2	N	469	473	anti-parallel
Strand 3	N	460	464	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	573	580	first strand
Strand 2	V	558	565	parallel
Strand 3	V	551	555	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	72	73	first strand
Strand 2	S	54	57	anti-parallel
Strand 3	S	41	46	anti-parallel
Strand 4	S	32	35	anti-parallel
Strand 5	S	86	88	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	142	143	first strand
Strand 2	S	131	135	anti-parallel
Strand 3	S	115	125	anti-parallel
Strand 4	S	105	109	anti-parallel
Strand 5	S	147	148	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	97	106	first strand
Strand 2	Z	192	203	anti-parallel
Strand 3	Z	123	132	anti-parallel
Strand 4	Z	137	140	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	116	117	first strand
Strand 2	Z	154	157	anti-parallel
Strand 3	Z	146	148	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	250	255	first strand
Strand 2	Z	258	264	anti-parallel
Strand 3	Y	248	255	anti-parallel
Strand 4	Y	258	263	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	97	106	first strand
Strand 2	Y	192	203	anti-parallel
Strand 3	Y	123	133	anti-parallel
Strand 4	Y	136	140	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	116	117	first strand
Strand 2	Y	154	157	anti-parallel
Strand 3	Y	146	148	anti-parallel

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There are 7 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	22	23	first strand
Strand 2	X	15	19	anti-parallel
Strand 3	X	91	97	anti-parallel
Strand 4	X	103	118	anti-parallel
Strand 5	X	126	132	anti-parallel
Strand 6	X	58	66	anti-parallel
Strand 7	X	27	35	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	22	23	first strand
Strand 2	X	15	19	anti-parallel
Strand 3	X	91	97	anti-parallel
Strand 4	X	103	118	anti-parallel
Strand 5	X	135	137	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	38	40	first strand
Strand 2	X	52	54	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	25	29	first strand
Strand 2	W	35	39	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	51	53	first strand
Strand 2	V	87	91	anti-parallel
Strand 3	V	36	40	parallel
Strand 4	V	333	337	parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	99	102	first strand
Strand 2	V	105	108	anti-parallel
Strand 3	V	266	269	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	143	150	first strand
Strand 2	V	131	138	anti-parallel
Strand 3	V	120	126	anti-parallel
Strand 4	V	303	307	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	216	219	first strand
Strand 2	V	152	158	anti-parallel
Strand 3	V	246	249	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	188	194	first strand
Strand 2	V	178	185	anti-parallel
Strand 3	V	165	171	anti-parallel
Strand 4	V	236	240	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	364	366	first strand
Strand 2	V	389	391	parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	405	407	first strand
Strand 2	V	396	399	anti-parallel
Strand 3	V	439	440	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	460	464	first strand
Strand 2	V	469	473	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	72	73	first strand
Strand 2	U	54	57	anti-parallel
Strand 3	U	42	46	anti-parallel
Strand 4	U	32	34	anti-parallel
Strand 5	U	86	88	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	115	119	first strand
Strand 2	U	105	109	anti-parallel
Strand 3	U	148	149	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	124	125	first strand
Strand 2	U	131	134	anti-parallel
Strand 3	U	141	142	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8R5G

Analysis of interatomic Contacts of Structural Units in PDB entry:
8R5G