Analysis of interatomic Contacts of Structural Units in PDB entry:
8R5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R5H entry

There are 8 chains in PDB entry 8R5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 655
R
 LYS 20LYS 105
C
 MET 6UNK 1015
U
 MET 1GLY 75
D
 GLY 13CYS 112
F
 LYS 349ASP 459
G
 MET 1PRO 105
H
 PRO 61GLN 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 8R5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 19Right-handed alpha
Helix 2
2
A
21 25Right-handed alpha
Helix 3
3
A
33 46Right-handed alpha
Helix 4
4
A
54 78Right-handed alpha
Helix 5
5
A
86 104Right-handed alpha
Helix 6
6
A
106 111Right-handed alpha
Helix 7
7
A
139 152Right-handed alpha
Helix 8
8
A
156 170Right-handed alpha
Helix 9
9
A
178 189Right-handed alpha
Helix 10
10
A
200 228Right-handed alpha
Helix 11
11
A
235 251Right-handed alpha
Helix 12
12
A
259 274Right-handed alpha
Helix 13
13
A
278 285Right-handed alpha
Helix 14
14
A
291 303Right-handed alpha
Helix 15
15
A
308 328Right-handed alpha
Helix 16
16
A
337 358Right-handed alpha
Helix 17
17
A
362 376Right-handed alpha
Helix 18
18
A
387 398Right-handed alpha
Helix 19
19
A
410 424Right-handed alpha
Helix 20
20
A
429 444Right-handed alpha
Helix 21
21
A
453 465Right-handed alpha
Helix 22
22
A
470 496Right-handed alpha
Helix 23
1
A
531 547Right-handed alpha
Helix 24
3
A
579 589Right-handed alpha
Helix 25
4
A
596 603Right-handed alpha
Helix 26
5
A
607 619Right-handed alpha
Helix 27
23
C
9 22Right-handed alpha
Helix 28
24
C
95 97Right-handed alpha
Helix 29
25
C
119 132Right-handed alpha
Helix 30
26
C
142 154Right-handed alpha
Helix 31
27
C
159 179Right-handed alpha
Helix 32
28
D
33 38Right-handed alpha
Helix 33
29
D
40 47Right-handed alpha
Helix 34
30
D
67 83Right-handed alpha
Helix 35
31
D
97 110Right-handed alpha
Helix 36
34
G
24 35Right-handed alpha
Helix 37
36
G
39 41Right-handed alpha
Helix 38
37
G
57 60Right-handed alpha
Helix 39
47
A
538 547Right-handed alpha
Helix 40
48
A
614 618Right-handed alpha
Helix 41
67
R
54 57Right-handed alpha
Helix 42
68
R
81 90Right-handed alpha
Helix 43
69
U
23 34Right-handed alpha
Helix 44
70
U
38 40Right-handed alpha
Helix 45
71
U
56 59Right-handed alpha
Helix 46
AA1
F
349 365Right-handed alpha
Helix 47
AA4
F
375 377Right-handed 310
Helix 48
AA5
F
381 386Right-handed alpha
Helix 49
AA6
F
389 394Right-handed alpha
Helix 50
AA7
F
399 409Right-handed alpha
Helix 51
AA8
F
414 433Right-handed alpha
Helix 52
AA9
F
437 456Right-handed alpha
Helix 53
AC1
H
157 170Right-handed alpha
Helix 54
AC2
H
172 178Right-handed 310
Helix 55
AC3
H
182 190Right-handed alpha
Helix 56
AC4
H
193 208Right-handed alpha
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There are 24 sheets in PDB entry 8R5H. Click on sheet of interest to get list of strands forming it: AA3, AA4, 9, 10, 11, 12, 13, 14, 15, 20, 22, A, B, 23, 24, 8, 1, 2, 3, 4, 6, 7, 25, 26,

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
104 112first strand
Strand 2
H
71 78anti-parallel
Strand 3
H
147 152parallel
Strand 4
H
129 130anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
95 97first strand
Strand 2
H
84 89anti-parallel
Strand 3
H
116 121anti-parallel
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There are 1 strands in 9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 46first strand
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There are 1 strands in 10 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 64first strand
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There are 1 strands in 11 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 78first strand
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There are 1 strands in 12 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
2 6first strand
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There are 1 strands in 13 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
12 16first strand
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There are 1 strands in 14 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
42 44first strand
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There are 1 strands in 15 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
66 70first strand
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There are 1 strands in 20 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 512first strand
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There are 1 strands in 22 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
552 556first strand
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
561 566first strand
Strand 2
A
573 578anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 594first strand
Strand 2
A
637 640anti-parallel
Strand 3
A
623 625anti-parallel
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There are 1 strands in 23 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
70 72first strand
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There are 1 strands in 24 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
78 80first strand
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There are 1 strands in 8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 32first strand
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There are 1 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
42 45first strand
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There are 1 strands in 2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
73 79first strand
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There are 1 strands in 3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 9first strand
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There are 1 strands in 4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
12 19first strand
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There are 1 strands in 6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
18 23first strand
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There are 1 strands in 7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 62first strand
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There are 1 strands in 25 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 32first strand
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There are 1 strands in 26 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
27 34first strand
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