Analysis of interatomic Contacts of Structural Units in PDB entry:
8R5R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R5R entry

There are 4 chains in PDB entry 8R5R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 40PHE 388
B
 LEU 40HIS 391
C
 LEU 40HIS 391
D
 LEU 40LEU 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 8R5R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 46Right-handed alpha
Helix 2
AA2
A
47 52Right-handed alpha
Helix 3
AA3
A
57 62Right-handed alpha
Helix 4
AA4
A
68 99Right-handed alpha
Helix 5
AA5
A
100 106Right-handed 310
Helix 6
AA6
A
107 128Right-handed alpha
Helix 7
AA7
A
128 133Right-handed alpha
Helix 8
AA8
A
136 145Right-handed alpha
Helix 9
AA9
A
155 166Right-handed alpha
Helix 10
AB1
A
187 198Right-handed alpha
Helix 11
AB2
A
200 211Right-handed alpha
Helix 12
AB3
A
221 243Right-handed alpha
Helix 13
AB4
A
247 267Right-handed alpha
Helix 14
AB5
A
269 279Right-handed alpha
Helix 15
AB6
A
285 298Right-handed alpha
Helix 16
AB7
A
301 303Right-handed 310
Helix 17
AB8
A
304 336Right-handed alpha
Helix 18
AB9
A
362 370Right-handed alpha
Helix 19
AC1
A
374 378Right-handed 310
Helix 20
AC2
A
382 388Right-handed alpha
Helix 21
AC3
B
41 46Right-handed alpha
Helix 22
AC4
B
47 52Right-handed alpha
Helix 23
AC5
B
57 62Right-handed alpha
Helix 24
AC6
B
68 99Right-handed alpha
Helix 25
AC7
B
100 106Right-handed 310
Helix 26
AC8
B
107 128Right-handed alpha
Helix 27
AC9
B
128 133Right-handed alpha
Helix 28
AD1
B
136 145Right-handed alpha
Helix 29
AD2
B
155 166Right-handed alpha
Helix 30
AD3
B
187 198Right-handed alpha
Helix 31
AD4
B
200 211Right-handed alpha
Helix 32
AD5
B
221 243Right-handed alpha
Helix 33
AD6
B
247 267Right-handed alpha
Helix 34
AD7
B
269 279Right-handed alpha
Helix 35
AD8
B
285 298Right-handed alpha
Helix 36
AD9
B
301 303Right-handed 310
Helix 37
AE1
B
304 336Right-handed alpha
Helix 38
AE2
B
362 370Right-handed alpha
Helix 39
AE3
B
374 378Right-handed 310
Helix 40
AE4
B
382 389Right-handed alpha
Helix 41
AE5
C
41 46Right-handed alpha
Helix 42
AE6
C
47 52Right-handed alpha
Helix 43
AE7
C
57 62Right-handed alpha
Helix 44
AE8
C
68 99Right-handed alpha
Helix 45
AE9
C
100 106Right-handed 310
Helix 46
AF1
C
107 128Right-handed alpha
Helix 47
AF2
C
128 133Right-handed alpha
Helix 48
AF3
C
136 142Right-handed alpha
Helix 49
AF4
C
155 166Right-handed alpha
Helix 50
AF5
C
187 198Right-handed alpha
Helix 51
AF6
C
200 211Right-handed alpha
Helix 52
AF7
C
221 243Right-handed alpha
Helix 53
AF8
C
247 267Right-handed alpha
Helix 54
AF9
C
269 279Right-handed alpha
Helix 55
AG1
C
285 298Right-handed alpha
Helix 56
AG2
C
301 303Right-handed 310
Helix 57
AG3
C
304 336Right-handed alpha
Helix 58
AG4
C
362 370Right-handed alpha
Helix 59
AG5
C
374 378Right-handed 310
Helix 60
AG6
C
382 389Right-handed alpha
Helix 61
AG7
D
41 46Right-handed alpha
Helix 62
AG8
D
47 52Right-handed alpha
Helix 63
AG9
D
57 62Right-handed alpha
Helix 64
AH1
D
68 99Right-handed alpha
Helix 65
AH2
D
100 106Right-handed 310
Helix 66
AH3
D
107 128Right-handed alpha
Helix 67
AH4
D
128 133Right-handed alpha
Helix 68
AH5
D
136 145Right-handed alpha
Helix 69
AH6
D
155 166Right-handed alpha
Helix 70
AH7
D
187 198Right-handed alpha
Helix 71
AH8
D
200 211Right-handed alpha
Helix 72
AH9
D
221 244Right-handed alpha
Helix 73
AI1
D
251 267Right-handed alpha
Helix 74
AI2
D
269 279Right-handed alpha
Helix 75
AI3
D
285 298Right-handed alpha
Helix 76
AI4
D
301 303Right-handed 310
Helix 77
AI5
D
304 336Right-handed alpha
Helix 78
AI6
D
362 370Right-handed alpha
Helix 79
AI7
D
374 378Right-handed 310
Helix 80
AI8
D
382 389Right-handed alpha
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There are no sheets in PDB entry 8R5R
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