Analysis of interatomic Contacts of Structural Units in PDB entry:
8R6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R6W entry

There are 5 chains in PDB entry 8R6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 2056
G
 A 1 C 4
P
 A 1 G 16
T
 C 10 U 26
C
 A 2 A 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 8R6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
72 76Right-handed 310
Helix 3
AA3
A
78 84Right-handed alpha
Helix 4
AA4
A
94 99Right-handed alpha
Helix 5
AA5
A
135 148Right-handed alpha
Helix 6
AA6
A
149 160Right-handed alpha
Helix 7
AA7
A
184 207Right-handed alpha
Helix 8
AA8
A
220 234Right-handed alpha
Helix 9
AA9
A
237 245Right-handed alpha
Helix 10
AB1
A
249 259Right-handed alpha
Helix 11
AB2
A
262 285Right-handed alpha
Helix 12
AB3
A
292 317Right-handed alpha
Helix 13
AB4
A
355 358Right-handed 310
Helix 14
AB5
A
359 374Right-handed alpha
Helix 15
AB6
A
387 393Right-handed alpha
Helix 16
AB7
A
416 427Right-handed alpha
Helix 17
AB8
A
436 446Right-handed alpha
Helix 18
AB9
A
457 463Right-handed alpha
Helix 19
AC1
A
477 492Right-handed alpha
Helix 20
AC2
A
496 511Right-handed alpha
Helix 21
AC3
A
512 534Right-handed alpha
Helix 22
AC4
A
602 611Right-handed alpha
Helix 23
AC5
A
611 627Right-handed alpha
Helix 24
AC6
A
638 655Right-handed alpha
Helix 25
AC7
A
658 671Right-handed alpha
Helix 26
AC8
A
682 685Right-handed 310
Helix 27
AC9
A
686 691Right-handed alpha
Helix 28
AD1
A
696 716Right-handed alpha
Helix 29
AD2
A
742 751Right-handed alpha
Helix 30
AD3
A
752 756Right-handed 310
Helix 31
AD4
A
767 780Right-handed alpha
Helix 32
AD5
A
784 788Right-handed 310
Helix 33
AD6
A
802 821Right-handed alpha
Helix 34
AD7
A
824 839Right-handed alpha
Helix 35
AD8
A
856 860Right-handed 310
Helix 36
AD9
A
873 884Right-handed alpha
Helix 37
AE1
A
888 891Right-handed 310
Helix 38
AE2
A
892 902Right-handed alpha
Helix 39
AE3
A
927 947Right-handed alpha
Helix 40
AE4
A
954 959Right-handed 310
Helix 41
AE5
A
963 973Right-handed alpha
Helix 42
AE6
A
994 1005Right-handed alpha
Helix 43
AE7
A
1007 1021Right-handed alpha
Helix 44
AE8
A
1029 1038Right-handed alpha
Helix 45
AE9
A
1046 1058Right-handed alpha
Helix 46
AF1
A
1085 1108Right-handed alpha
Helix 47
AF2
A
1138 1160Right-handed alpha
Helix 48
AF3
A
1161 1163Right-handed 310
Helix 49
AF4
A
1195 1201Right-handed alpha
Helix 50
AF5
A
1211 1228Right-handed alpha
Helix 51
AF6
A
1231 1251Right-handed alpha
Helix 52
AF7
A
1257 1268Right-handed alpha
Helix 53
AF8
A
1288 1299Right-handed alpha
Helix 54
AF9
A
1301 1315Right-handed alpha
Helix 55
AG1
A
1345 1355Right-handed alpha
Helix 56
AG2
A
1360 1368Right-handed alpha
Helix 57
AG3
A
1378 1390Right-handed alpha
Helix 58
AG4
A
1403 1411Right-handed alpha
Helix 59
AG5
A
1412 1414Right-handed 310
Helix 60
AG6
A
1437 1446Right-handed alpha
Helix 61
AG7
A
1448 1453Right-handed alpha
Helix 62
AG8
A
1457 1465Right-handed alpha
Helix 63
AG9
A
1467 1481Right-handed alpha
Helix 64
AH1
A
1512 1523Right-handed alpha
Helix 65
AH2
A
1530 1545Right-handed alpha
Helix 66
AH3
A
1551 1559Right-handed alpha
Helix 67
AH4
A
1563 1574Right-handed alpha
Helix 68
AH5
A
1596 1603Right-handed alpha
Helix 69
AH6
A
1625 1638Right-handed alpha
Helix 70
AH7
A
1642 1657Right-handed alpha
Helix 71
AH8
A
1670 1683Right-handed alpha
Helix 72
AH9
A
1687 1696Right-handed alpha
Helix 73
AI1
A
1757 1773Right-handed alpha
Helix 74
AI2
A
1858 1868Right-handed alpha
Helix 75
AI3
A
1869 1872Right-handed 310
Helix 76
AI4
A
1890 1902Right-handed alpha
Helix 77
AI5
A
1913 1931Right-handed alpha
Helix 78
AI6
A
1979 1983Right-handed 310
Helix 79
AI7
A
1997 2004Right-handed alpha
Helix 80
AI8
A
2016 2027Right-handed alpha
Helix 81
AI9
A
2031 2037Right-handed alpha
Helix 82
AJ1
A
2044 2047Right-handed 310
Helix 83
AJ2
A
2048 2054Right-handed alpha
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There are 16 sheets in PDB entry 8R6W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
165 167parallel
Strand 3
A
121 125parallel
Strand 4
A
113 117anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
44 49anti-parallel
Strand 3
A
66 70anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 129first strand
Strand 2
A
170 172parallel
Strand 3
A
178 179anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
551 556anti-parallel
Strand 4
A
564 570anti-parallel
Strand 5
A
594 595anti-parallel
Strand 6
A
588 589anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
551 556anti-parallel
Strand 4
A
564 570anti-parallel
Strand 5
A
599 601anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 722first strand
Strand 2
A
727 730anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
851 852first strand
Strand 2
A
925 926parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
906 908first strand
Strand 2
A
1024 1027parallel
Strand 3
A
1071 1072anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1123first strand
Strand 2
A
1128 1134anti-parallel
Strand 3
A
978 984anti-parallel
Strand 4
A
1172 1175anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1178 1180first strand
Strand 2
A
1185 1187anti-parallel
Strand 3
A
1190 1192anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1328 1329first strand
Strand 2
A
1333 1334anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1337 1338first strand
Strand 2
A
1421 1423anti-parallel
Strand 3
A
1435 1436anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1499 1501first strand
Strand 2
A
1580 1582anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1699 1705first strand
Strand 2
A
1715 1729anti-parallel
Strand 3
A
1708 1712anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1699 1705first strand
Strand 2
A
1715 1729anti-parallel
Strand 3
A
1734 1740anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1790 1791first strand
Strand 2
A
1794 1795anti-parallel
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