Analysis of interatomic Contacts of Structural Units in PDB entry:
8R70

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8R70 entry

There are 2 chains in PDB entry 8R70 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 27	LYS 644
B	TYR 26	LEU 32

There are 50 helices in PDB entry 8R70. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	36	Right-handed alpha
Helix 2	AA2	A	37	45	Right-handed alpha
Helix 3	AA3	A	59	68	Right-handed alpha
Helix 4	AA4	A	69	80	Right-handed alpha
Helix 5	AA5	A	90	101	Right-handed alpha
Helix 6	AA6	A	103	128	Right-handed alpha
Helix 7	AA7	A	132	146	Right-handed alpha
Helix 8	AA8	A	154	158	Right-handed 310
Helix 9	AA9	A	173	198	Right-handed alpha
Helix 10	AB1	A	199	213	Right-handed alpha
Helix 11	AB2	A	213	220	Right-handed alpha
Helix 12	AB3	A	223	227	Right-handed 310
Helix 13	AB4	A	238	255	Right-handed alpha
Helix 14	AB5	A	257	279	Right-handed alpha
Helix 15	AB6	A	288	294	Right-handed 310
Helix 16	AB7	A	295	310	Right-handed alpha
Helix 17	AB8	A	319	332	Right-handed alpha
Helix 18	AB9	A	352	363	Right-handed alpha
Helix 19	AC1	A	365	376	Right-handed alpha
Helix 20	AC2	A	388	405	Right-handed alpha
Helix 21	AC3	A	478	490	Right-handed 310
Helix 22	AC4	A	495	498	Right-handed 310
Helix 23	AC5	A	525	528	Right-handed 310
Helix 24	AC6	A	529	532	Right-handed 310
Helix 25	AC7	A	609	617	Right-handed alpha
Helix 26	AC8	B	30	36	Right-handed alpha
Helix 27	AC9	B	37	45	Right-handed alpha
Helix 28	AD1	B	59	68	Right-handed alpha
Helix 29	AD2	B	69	80	Right-handed alpha
Helix 30	AD3	B	90	101	Right-handed alpha
Helix 31	AD4	B	103	128	Right-handed alpha
Helix 32	AD5	B	132	146	Right-handed alpha
Helix 33	AD6	B	154	158	Right-handed 310
Helix 34	AD7	B	173	198	Right-handed alpha
Helix 35	AD8	B	199	213	Right-handed alpha
Helix 36	AD9	B	213	220	Right-handed alpha
Helix 37	AE1	B	223	227	Right-handed 310
Helix 38	AE2	B	238	255	Right-handed alpha
Helix 39	AE3	B	257	279	Right-handed alpha
Helix 40	AE4	B	291	294	Right-handed 310
Helix 41	AE5	B	295	310	Right-handed alpha
Helix 42	AE6	B	319	332	Right-handed alpha
Helix 43	AE7	B	352	363	Right-handed alpha
Helix 44	AE8	B	365	376	Right-handed alpha
Helix 45	AE9	B	388	405	Right-handed alpha
Helix 46	AF1	B	482	490	Right-handed 310
Helix 47	AF2	B	495	498	Right-handed 310
Helix 48	AF3	B	525	528	Right-handed 310
Helix 49	AF4	B	529	532	Right-handed 310
Helix 50	AF5	B	609	617	Right-handed alpha

There are 10 sheets in PDB entry 8R70. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	333	335	first strand
Strand 2	A	338	339	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	417	first strand
Strand 2	A	422	426	anti-parallel
Strand 3	A	431	436	anti-parallel
Strand 4	A	452	456	anti-parallel
Strand 5	A	459	462	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	439	440	first strand
Strand 2	A	503	507	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	493	494	first strand
Strand 2	A	564	569	anti-parallel
Strand 3	A	619	626	anti-parallel
Strand 4	A	599	606	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	509	514	first strand
Strand 2	A	519	523	anti-parallel
Strand 3	A	534	543	anti-parallel
Strand 4	A	547	556	anti-parallel
Strand 5	A	633	642	anti-parallel
Strand 6	A	588	593	anti-parallel
Strand 7	A	580	585	anti-parallel
Strand 8	A	572	577	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	333	335	first strand
Strand 2	B	338	339	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	417	first strand
Strand 2	B	422	426	anti-parallel
Strand 3	B	431	436	anti-parallel
Strand 4	B	452	456	anti-parallel
Strand 5	B	459	462	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	439	440	first strand
Strand 2	B	503	507	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	493	494	first strand
Strand 2	B	564	569	anti-parallel
Strand 3	B	619	626	anti-parallel
Strand 4	B	599	606	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	509	514	first strand
Strand 2	B	519	523	anti-parallel
Strand 3	B	534	543	anti-parallel
Strand 4	B	547	556	anti-parallel
Strand 5	B	633	642	anti-parallel
Strand 6	B	588	593	anti-parallel
Strand 7	B	580	585	anti-parallel
Strand 8	B	572	577	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8R70

Analysis of interatomic Contacts of Structural Units in PDB entry:
8R70