Analysis of interatomic Contacts of Structural Units in PDB entry:
8R7E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8R7E entry

There are 8 chains in PDB entry 8R7E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 13	ILE 930
B	SER 227	GLU 1124
C	T 3	G 24
D	C 27	G 49
E	SER 13	ILE 930
F	LYS 226	LYS 1121
G	C 4	G 24
H	C 27	G 49

There are144 helices in PDB entry 8R7E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	25	Right-handed alpha
Helix 2	AA2	A	47	57	Right-handed alpha
Helix 3	AA3	A	81	95	Right-handed alpha
Helix 4	AA4	A	184	195	Right-handed alpha
Helix 5	AA5	A	208	220	Right-handed alpha
Helix 6	AA6	A	229	233	Right-handed 310
Helix 7	AA7	A	236	245	Right-handed alpha
Helix 8	AA8	A	254	262	Right-handed 310
Helix 9	AA9	A	263	278	Right-handed alpha
Helix 10	AB1	A	279	286	Right-handed 310
Helix 11	AB2	A	303	310	Right-handed alpha
Helix 12	AB3	A	325	331	Right-handed alpha
Helix 13	AB4	A	335	348	Right-handed alpha
Helix 14	AB5	A	352	369	Right-handed alpha
Helix 15	AB6	A	369	379	Right-handed alpha
Helix 16	AB7	A	380	384	Right-handed 310
Helix 17	AB8	A	386	396	Right-handed alpha
Helix 18	AB9	A	400	412	Right-handed alpha
Helix 19	AC1	A	413	423	Right-handed alpha
Helix 20	AC2	A	428	436	Right-handed alpha
Helix 21	AC3	A	436	458	Right-handed alpha
Helix 22	AC4	A	461	466	Right-handed 310
Helix 23	AC5	A	475	494	Right-handed alpha
Helix 24	AC6	A	553	586	Right-handed alpha
Helix 25	AC7	A	588	615	Right-handed alpha
Helix 26	AC8	A	674	691	Right-handed alpha
Helix 27	AC9	A	723	739	Right-handed alpha
Helix 28	AD1	A	755	774	Right-handed alpha
Helix 29	AD2	A	785	788	Right-handed 310
Helix 30	AD3	A	789	794	Right-handed alpha
Helix 31	AD4	A	826	834	Right-handed alpha
Helix 32	AD5	A	837	853	Right-handed alpha
Helix 33	AD6	A	871	893	Right-handed alpha
Helix 34	AD7	A	900	918	Right-handed alpha
Helix 35	AD8	A	920	929	Right-handed alpha
Helix 36	AD9	B	230	243	Right-handed alpha
Helix 37	AE1	B	260	271	Right-handed alpha
Helix 38	AE2	B	289	301	Right-handed alpha
Helix 39	AE3	B	312	318	Right-handed alpha
Helix 40	AE4	B	411	422	Right-handed alpha
Helix 41	AE5	B	433	446	Right-handed alpha
Helix 42	AE6	B	459	463	Right-handed 310
Helix 43	AE7	B	464	478	Right-handed alpha
Helix 44	AE8	B	496	513	Right-handed alpha
Helix 45	AE9	B	515	520	Right-handed 310
Helix 46	AF1	B	538	545	Right-handed alpha
Helix 47	AF2	B	559	565	Right-handed alpha
Helix 48	AF3	B	569	582	Right-handed alpha
Helix 49	AF4	B	586	603	Right-handed alpha
Helix 50	AF5	B	606	616	Right-handed alpha
Helix 51	AF6	B	620	630	Right-handed alpha
Helix 52	AF7	B	634	654	Right-handed alpha
Helix 53	AF8	B	655	663	Right-handed alpha
Helix 54	AF9	B	665	679	Right-handed alpha
Helix 55	AG1	B	681	689	Right-handed alpha
Helix 56	AG2	B	690	697	Right-handed alpha
Helix 57	AG3	B	705	708	Right-handed 310
Helix 58	AG4	B	709	737	Right-handed alpha
Helix 59	AG5	B	760	764	Right-handed 310
Helix 60	AG6	B	782	815	Right-handed alpha
Helix 61	AG7	B	817	843	Right-handed alpha
Helix 62	AG8	B	866	871	Right-handed alpha
Helix 63	AG9	B	901	919	Right-handed alpha
Helix 64	AH1	B	951	966	Right-handed alpha
Helix 65	AH2	B	982	1000	Right-handed alpha
Helix 66	AH3	B	1011	1016	Right-handed alpha
Helix 67	AH4	B	1016	1021	Right-handed alpha
Helix 68	AH5	B	1067	1076	Right-handed alpha
Helix 69	AH6	B	1079	1112	Right-handed alpha
Helix 70	AH7	B	1117	1124	Right-handed alpha
Helix 71	AH8	E	14	25	Right-handed alpha
Helix 72	AH9	E	47	57	Right-handed alpha
Helix 73	AI1	E	81	95	Right-handed alpha
Helix 74	AI2	E	128	130	Right-handed 310
Helix 75	AI3	E	131	136	Right-handed alpha
Helix 76	AI4	E	184	195	Right-handed alpha
Helix 77	AI5	E	208	220	Right-handed alpha
Helix 78	AI6	E	228	233	Right-handed 310
Helix 79	AI7	E	236	245	Right-handed alpha
Helix 80	AI8	E	254	262	Right-handed 310
Helix 81	AI9	E	263	278	Right-handed alpha
Helix 82	AJ1	E	279	286	Right-handed 310
Helix 83	AJ2	E	303	310	Right-handed alpha
Helix 84	AJ3	E	325	331	Right-handed alpha
Helix 85	AJ4	E	335	348	Right-handed alpha
Helix 86	AJ5	E	352	369	Right-handed alpha
Helix 87	AJ6	E	369	379	Right-handed alpha
Helix 88	AJ7	E	380	384	Right-handed 310
Helix 89	AJ8	E	386	396	Right-handed alpha
Helix 90	AJ9	E	400	412	Right-handed alpha
Helix 91	AK1	E	413	423	Right-handed alpha
Helix 92	AK2	E	428	436	Right-handed alpha
Helix 93	AK3	E	436	447	Right-handed alpha
Helix 94	AK4	E	447	458	Right-handed alpha
Helix 95	AK5	E	461	466	Right-handed 310
Helix 96	AK6	E	475	504	Right-handed alpha
Helix 97	AK7	E	526	533	Right-handed 310
Helix 98	AK8	E	553	586	Right-handed alpha
Helix 99	AK9	E	588	615	Right-handed alpha
Helix 100	AL1	E	674	691	Right-handed alpha
Helix 101	AL2	E	723	739	Right-handed alpha
Helix 102	AL3	E	755	773	Right-handed alpha
Helix 103	AL4	E	784	788	Right-handed 310
Helix 104	AL5	E	789	794	Right-handed alpha
Helix 105	AL6	E	826	834	Right-handed alpha
Helix 106	AL7	E	837	853	Right-handed alpha
Helix 107	AL8	E	868	893	Right-handed alpha
Helix 108	AL9	E	900	919	Right-handed alpha
Helix 109	AM1	E	920	929	Right-handed alpha
Helix 110	AM2	F	230	243	Right-handed alpha
Helix 111	AM3	F	260	271	Right-handed alpha
Helix 112	AM4	F	289	301	Right-handed alpha
Helix 113	AM5	F	312	318	Right-handed alpha
Helix 114	AM6	F	411	422	Right-handed alpha
Helix 115	AM7	F	433	446	Right-handed alpha
Helix 116	AM8	F	459	463	Right-handed 310
Helix 117	AM9	F	464	477	Right-handed alpha
Helix 118	AN1	F	496	513	Right-handed alpha
Helix 119	AN2	F	515	520	Right-handed 310
Helix 120	AN3	F	521	525	Right-handed 310
Helix 121	AN4	F	538	545	Right-handed alpha
Helix 122	AN5	F	559	565	Right-handed alpha
Helix 123	AN6	F	569	582	Right-handed alpha
Helix 124	AN7	F	586	602	Right-handed alpha
Helix 125	AN8	F	606	616	Right-handed alpha
Helix 126	AN9	F	620	630	Right-handed alpha
Helix 127	AO1	F	634	654	Right-handed alpha
Helix 128	AO2	F	655	663	Right-handed alpha
Helix 129	AO3	F	665	679	Right-handed alpha
Helix 130	AO4	F	681	689	Right-handed alpha
Helix 131	AO5	F	690	697	Right-handed alpha
Helix 132	AO6	F	709	737	Right-handed alpha
Helix 133	AO7	F	760	764	Right-handed 310
Helix 134	AO8	F	782	815	Right-handed alpha
Helix 135	AO9	F	817	843	Right-handed alpha
Helix 136	AP1	F	866	871	Right-handed alpha
Helix 137	AP2	F	901	919	Right-handed alpha
Helix 138	AP3	F	951	966	Right-handed alpha
Helix 139	AP4	F	982	1000	Right-handed alpha
Helix 140	AP5	F	1011	1016	Right-handed alpha
Helix 141	AP6	F	1016	1021	Right-handed alpha
Helix 142	AP7	F	1067	1076	Right-handed alpha
Helix 143	AP8	F	1079	1112	Right-handed alpha
Helix 144	AP9	F	1115	1121	Right-handed 310

There are 22 sheets in PDB entry 8R7E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	67	first strand
Strand 2	A	75	80	anti-parallel
Strand 3	A	43	46	anti-parallel
Strand 4	A	33	38	anti-parallel
Strand 5	A	99	104	parallel
Strand 6	A	118	123	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	226	first strand
Strand 2	A	198	201	parallel
Strand 3	A	147	152	parallel
Strand 4	A	160	167	anti-parallel
Strand 5	A	172	179	anti-parallel
Strand 6	A	290	293	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	302	first strand
Strand 2	A	707	711	parallel
Strand 3	A	744	748	parallel
Strand 4	A	777	781	parallel
Strand 5	A	664	668	parallel
Strand 6	A	800	801	parallel
Strand 7	A	818	819	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	512	first strand
Strand 2	A	523	525	anti-parallel
Strand 3	A	550	551	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	623	625	first strand
Strand 2	A	699	703	parallel
Strand 3	A	631	637	anti-parallel
Strand 4	A	653	658	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	804	807	first strand
Strand 2	A	810	813	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	277	first strand
Strand 2	B	280	286	anti-parallel
Strand 3	B	255	259	anti-parallel
Strand 4	B	246	252	anti-parallel
Strand 5	B	303	309	parallel
Strand 6	B	328	334	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	458	first strand
Strand 2	B	425	429	parallel
Strand 3	B	368	374	parallel
Strand 4	B	386	393	anti-parallel
Strand 5	B	400	407	anti-parallel
Strand 6	B	526	527	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	745	747	first strand
Strand 2	B	750	757	anti-parallel
Strand 3	B	777	781	anti-parallel
Strand 4	B	769	773	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	850	852	first strand
Strand 2	B	926	930	parallel
Strand 3	B	856	862	anti-parallel
Strand 4	B	880	884	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	935	938	first strand
Strand 2	B	971	975	parallel
Strand 3	B	1004	1008	parallel
Strand 4	B	891	895	parallel
Strand 5	B	1025	1033	parallel
Strand 6	B	1054	1061	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	67	first strand
Strand 2	E	75	80	anti-parallel
Strand 3	E	43	46	anti-parallel
Strand 4	E	33	38	anti-parallel
Strand 5	E	99	105	parallel
Strand 6	E	117	123	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	223	226	first strand
Strand 2	E	198	201	parallel
Strand 3	E	147	153	parallel
Strand 4	E	160	167	anti-parallel
Strand 5	E	172	179	anti-parallel
Strand 6	E	290	293	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	301	302	first strand
Strand 2	E	707	712	parallel
Strand 3	E	744	748	parallel
Strand 4	E	777	781	parallel
Strand 5	E	664	668	parallel
Strand 6	E	800	801	parallel
Strand 7	E	818	819	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	512	515	first strand
Strand 2	E	521	525	anti-parallel
Strand 3	E	548	552	anti-parallel
Strand 4	E	540	545	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	623	625	first strand
Strand 2	E	699	703	parallel
Strand 3	E	632	637	anti-parallel
Strand 4	E	653	657	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	804	807	first strand
Strand 2	E	810	813	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	275	277	first strand
Strand 2	F	280	286	anti-parallel
Strand 3	F	255	259	anti-parallel
Strand 4	F	246	252	anti-parallel
Strand 5	F	303	309	parallel
Strand 6	F	328	334	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	454	458	first strand
Strand 2	F	425	429	parallel
Strand 3	F	368	374	parallel
Strand 4	F	386	393	anti-parallel
Strand 5	F	400	407	anti-parallel
Strand 6	F	526	527	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	536	537	first strand
Strand 2	F	934	938	parallel
Strand 3	F	971	975	parallel
Strand 4	F	1004	1008	parallel
Strand 5	F	891	895	parallel
Strand 6	F	1025	1030	parallel
Strand 7	F	1059	1061	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	745	747	first strand
Strand 2	F	750	757	anti-parallel
Strand 3	F	777	781	anti-parallel
Strand 4	F	769	773	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	850	852	first strand
Strand 2	F	926	930	parallel
Strand 3	F	856	862	anti-parallel
Strand 4	F	880	884	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8R7E

Analysis of interatomic Contacts of Structural Units in PDB entry:
8R7E