Analysis of interatomic Contacts of Structural Units in PDB entry:
8R7H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8R7H entry

There are 6 chains in PDB entry 8R7H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 16	HIS 256
A	THR 258	LEU 480
B	SER 16	PRO 481
C	SER 16	PRO 481
D	SER 16	HIS 256
D	THR 258	LEU 480

There are 82 helices in PDB entry 8R7H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	22	Right-handed alpha
Helix 2	AA2	A	25	30	Right-handed alpha
Helix 3	AA3	A	30	46	Right-handed alpha
Helix 4	AA4	A	58	66	Right-handed alpha
Helix 5	AA5	A	67	71	Right-handed 310
Helix 6	AA6	A	86	104	Right-handed alpha
Helix 7	AA7	A	119	132	Right-handed alpha
Helix 8	AA8	A	148	152	Right-handed 310
Helix 9	AA9	A	161	167	Right-handed alpha
Helix 10	AB1	A	182	194	Right-handed alpha
Helix 11	AB2	A	210	222	Right-handed alpha
Helix 12	AB3	A	232	239	Right-handed alpha
Helix 13	AB4	A	243	247	Right-handed 310
Helix 14	AB5	A	287	297	Right-handed alpha
Helix 15	AB6	A	305	320	Right-handed alpha
Helix 16	AB7	A	321	345	Right-handed alpha
Helix 17	AB8	A	369	380	Right-handed alpha
Helix 18	AB9	A	405	410	Right-handed alpha
Helix 19	AC1	A	414	440	Right-handed alpha
Helix 20	AC2	A	444	453	Right-handed alpha
Helix 21	AC3	A	457	473	Right-handed alpha
Helix 22	AC4	B	17	21	Right-handed alpha
Helix 23	AC5	B	25	30	Right-handed alpha
Helix 24	AC6	B	30	47	Right-handed alpha
Helix 25	AC7	B	58	66	Right-handed alpha
Helix 26	AC8	B	67	71	Right-handed 310
Helix 27	AC9	B	86	104	Right-handed alpha
Helix 28	AD1	B	119	132	Right-handed alpha
Helix 29	AD2	B	161	167	Right-handed alpha
Helix 30	AD3	B	182	194	Right-handed alpha
Helix 31	AD4	B	210	222	Right-handed alpha
Helix 32	AD5	B	243	247	Right-handed 310
Helix 33	AD6	B	287	297	Right-handed alpha
Helix 34	AD7	B	305	320	Right-handed alpha
Helix 35	AD8	B	321	345	Right-handed alpha
Helix 36	AD9	B	369	380	Right-handed alpha
Helix 37	AE1	B	406	412	Right-handed alpha
Helix 38	AE2	B	414	440	Right-handed alpha
Helix 39	AE3	B	444	451	Right-handed alpha
Helix 40	AE4	B	454	473	Right-handed alpha
Helix 41	AE5	C	17	22	Right-handed alpha
Helix 42	AE6	C	25	30	Right-handed alpha
Helix 43	AE7	C	30	46	Right-handed alpha
Helix 44	AE8	C	58	66	Right-handed alpha
Helix 45	AE9	C	67	71	Right-handed 310
Helix 46	AF1	C	86	104	Right-handed alpha
Helix 47	AF2	C	119	132	Right-handed alpha
Helix 48	AF3	C	161	167	Right-handed alpha
Helix 49	AF4	C	182	194	Right-handed alpha
Helix 50	AF5	C	210	222	Right-handed alpha
Helix 51	AF6	C	232	238	Right-handed alpha
Helix 52	AF7	C	243	247	Right-handed 310
Helix 53	AF8	C	287	297	Right-handed alpha
Helix 54	AF9	C	305	320	Right-handed alpha
Helix 55	AG1	C	321	345	Right-handed alpha
Helix 56	AG2	C	349	353	Right-handed 310
Helix 57	AG3	C	369	380	Right-handed alpha
Helix 58	AG4	C	405	412	Right-handed alpha
Helix 59	AG5	C	414	440	Right-handed alpha
Helix 60	AG6	C	444	453	Right-handed alpha
Helix 61	AG7	C	454	473	Right-handed alpha
Helix 62	AG8	D	17	22	Right-handed alpha
Helix 63	AG9	D	25	30	Right-handed alpha
Helix 64	AH1	D	30	47	Right-handed alpha
Helix 65	AH2	D	58	66	Right-handed alpha
Helix 66	AH3	D	67	71	Right-handed 310
Helix 67	AH4	D	86	104	Right-handed alpha
Helix 68	AH5	D	119	132	Right-handed alpha
Helix 69	AH6	D	142	146	Right-handed 310
Helix 70	AH7	D	148	152	Right-handed 310
Helix 71	AH8	D	161	167	Right-handed alpha
Helix 72	AH9	D	182	194	Right-handed alpha
Helix 73	AI1	D	210	222	Right-handed alpha
Helix 74	AI2	D	243	247	Right-handed 310
Helix 75	AI3	D	287	297	Right-handed alpha
Helix 76	AI4	D	305	320	Right-handed alpha
Helix 77	AI5	D	321	345	Right-handed alpha
Helix 78	AI6	D	369	380	Right-handed alpha
Helix 79	AI7	D	405	410	Right-handed alpha
Helix 80	AI8	D	414	440	Right-handed alpha
Helix 81	AI9	D	444	453	Right-handed alpha
Helix 82	AJ1	D	454	473	Right-handed alpha

There are 16 sheets in PDB entry 8R7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	114	first strand
Strand 2	A	265	270	anti-parallel
Strand 3	A	250	254	anti-parallel
Strand 4	A	224	228	parallel
Strand 5	A	197	201	parallel
Strand 6	A	137	139	parallel
Strand 7	A	168	169	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	276	first strand
Strand 2	A	283	285	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	349	first strand
Strand 2	A	358	362	anti-parallel
Strand 3	A	400	404	anti-parallel
Strand 4	A	385	387	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	114	first strand
Strand 2	B	265	270	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	224	228	parallel
Strand 5	B	197	201	parallel
Strand 6	B	137	139	parallel
Strand 7	B	168	169	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	276	first strand
Strand 2	B	283	285	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	362	first strand
Strand 2	B	400	403	anti-parallel
Strand 3	B	385	387	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	49	first strand
Strand 2	C	382	383	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	77	first strand
Strand 2	C	80	81	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	114	first strand
Strand 2	C	265	270	anti-parallel
Strand 3	C	250	254	anti-parallel
Strand 4	C	224	228	parallel
Strand 5	C	197	201	parallel
Strand 6	C	137	139	parallel
Strand 7	C	168	169	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	277	first strand
Strand 2	C	282	285	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	362	first strand
Strand 2	C	400	404	anti-parallel
Strand 3	C	385	386	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	49	first strand
Strand 2	D	382	383	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	77	first strand
Strand 2	D	80	81	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	114	first strand
Strand 2	D	265	270	anti-parallel
Strand 3	D	250	254	anti-parallel
Strand 4	D	224	228	parallel
Strand 5	D	197	201	parallel
Strand 6	D	137	139	parallel
Strand 7	D	168	169	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	273	276	first strand
Strand 2	D	283	285	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	348	349	first strand
Strand 2	D	358	362	anti-parallel
Strand 3	D	400	404	anti-parallel
Strand 4	D	385	387	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8R7H

Analysis of interatomic Contacts of Structural Units in PDB entry:
8R7H