Analysis of interatomic Contacts of Structural Units in PDB entry:
8R7K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R7K entry

There are 4 chains in PDB entry 8R7K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 602VAL 980
B
 THR 5LEU 395
C
 ASP 17GLU 68
H
 LEU 10ASP 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 8R7K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
602 619Right-handed alpha
Helix 2
AA2
A
644 652Right-handed alpha
Helix 3
AA3
A
693 707Right-handed alpha
Helix 4
AA4
A
716 738Right-handed alpha
Helix 5
AA5
A
743 762Right-handed alpha
Helix 6
AA6
A
771 797Right-handed alpha
Helix 7
AA7
A
802 814Right-handed alpha
Helix 8
AA8
A
819 826Right-handed alpha
Helix 9
AA9
A
828 833Right-handed alpha
Helix 10
AB1
A
834 845Right-handed alpha
Helix 11
AB2
A
851 861Right-handed alpha
Helix 12
AB3
A
863 871Right-handed alpha
Helix 13
AB4
A
873 889Right-handed alpha
Helix 14
AB5
A
901 908Right-handed alpha
Helix 15
AB6
A
912 922Right-handed alpha
Helix 16
AB7
A
951 956Right-handed alpha
Helix 17
AB8
A
961 968Right-handed alpha
Helix 18
AB9
B
6 19Right-handed alpha
Helix 19
AC1
B
21 30Right-handed alpha
Helix 20
AC2
B
47 52Right-handed alpha
Helix 21
AC3
B
55 75Right-handed alpha
Helix 22
AC4
B
76 97Right-handed alpha
Helix 23
AC5
B
104 125Right-handed alpha
Helix 24
AC6
B
136 142Right-handed alpha
Helix 25
AC7
B
144 155Right-handed alpha
Helix 26
AC8
B
168 172Right-handed 310
Helix 27
AC9
B
175 180Right-handed alpha
Helix 28
AD1
B
190 197Right-handed alpha
Helix 29
AD2
B
207 223Right-handed alpha
Helix 30
AD3
B
225 239Right-handed alpha
Helix 31
AD4
B
244 259Right-handed alpha
Helix 32
AD5
B
267 274Right-handed alpha
Helix 33
AD6
B
278 286Right-handed alpha
Helix 34
AD7
B
293 301Right-handed alpha
Helix 35
AD8
B
310 315Right-handed alpha
Helix 36
AD9
B
317 334Right-handed alpha
Helix 37
AE1
B
340 351Right-handed alpha
Helix 38
AE2
B
356 371Right-handed alpha
Helix 39
AE3
C
51 59Right-handed alpha
Helix 40
AE4
H
47 51Right-handed 310
Helix 41
AE5
H
54 59Right-handed alpha
Helix 42
AE6
H
69 80Right-handed alpha
Helix 43
AE7
H
94 102Right-handed alpha
Helix 44
AE8
H
102 107Right-handed alpha
Helix 45
AE9
H
122 137Right-handed alpha
Helix 46
AF1
H
154 164Right-handed alpha
Helix 47
AF2
H
172 181Right-handed alpha
Helix 48
AF3
H
197 203Right-handed alpha
Helix 49
AF4
H
207 215Right-handed alpha
Helix 50
AF5
H
235 240Right-handed alpha
Helix 51
AF6
H
241 243Right-handed 310
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There are 4 sheets in PDB entry 8R7K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
897 900first strand
Strand 2
A
931 934anti-parallel
Strand 3
A
927 928anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 339first strand
Strand 2
B
383 385anti-parallel
Strand 3
B
376 378anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
227 228first strand
Strand 2
H
86 88parallel
Strand 3
H
248 249parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
145 148first strand
Strand 2
H
168 171parallel
Strand 3
H
116 119parallel
Strand 4
H
192 195parallel
Strand 5
H
223 224parallel
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