Analysis of interatomic Contacts of Structural Units in PDB entry:
8R7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R7L entry

There are 5 chains in PDB entry 8R7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 LEU 52GLU 425
A
 GLU 44LYS 528
B
 GLN 142LYS 1177
C
 GLY 30ASN 349
D
 ALA 2GLY 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 8R7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
53 64Right-handed alpha
Helix 2
AA2
H
69 80Right-handed alpha
Helix 3
AA3
H
95 107Right-handed alpha
Helix 4
AA4
H
122 137Right-handed alpha
Helix 5
AA5
H
153 163Right-handed alpha
Helix 6
AA6
H
172 181Right-handed alpha
Helix 7
AA7
H
197 204Right-handed alpha
Helix 8
AA8
H
204 218Right-handed alpha
Helix 9
AA9
H
235 240Right-handed alpha
Helix 10
AB1
H
241 243Right-handed 310
Helix 11
AB2
H
273 285Right-handed alpha
Helix 12
AB3
H
296 310Right-handed alpha
Helix 13
AB4
H
322 335Right-handed alpha
Helix 14
AB5
H
367 376Right-handed alpha
Helix 15
AB6
H
393 408Right-handed alpha
Helix 16
AB7
A
45 65Right-handed alpha
Helix 17
AB8
A
72 84Right-handed alpha
Helix 18
AB9
A
92 104Right-handed alpha
Helix 19
AC1
A
106 120Right-handed alpha
Helix 20
AC2
A
134 147Right-handed alpha
Helix 21
AC3
A
152 167Right-handed alpha
Helix 22
AC4
A
231 247Right-handed alpha
Helix 23
AC5
A
248 251Right-handed 310
Helix 24
AC6
A
254 275Right-handed alpha
Helix 25
AC7
A
309 314Right-handed alpha
Helix 26
AC8
A
314 334Right-handed alpha
Helix 27
AC9
A
346 366Right-handed alpha
Helix 28
AD1
A
370 389Right-handed alpha
Helix 29
AD2
A
435 443Right-handed alpha
Helix 30
AD3
A
489 503Right-handed alpha
Helix 31
AD4
A
517 528Right-handed alpha
Helix 32
AD5
B
143 156Right-handed alpha
Helix 33
AD6
B
168 180Right-handed alpha
Helix 34
AD7
B
189 204Right-handed alpha
Helix 35
AD8
B
206 221Right-handed alpha
Helix 36
AD9
B
225 237Right-handed alpha
Helix 37
AE1
B
242 254Right-handed alpha
Helix 38
AE2
B
263 276Right-handed alpha
Helix 39
AE3
B
280 287Right-handed alpha
Helix 40
AE4
B
292 308Right-handed alpha
Helix 41
AE5
B
344 353Right-handed alpha
Helix 42
AE6
B
358 366Right-handed alpha
Helix 43
AE7
B
372 375Right-handed 310
Helix 44
AE8
B
376 399Right-handed alpha
Helix 45
AE9
B
425 437Right-handed alpha
Helix 46
AF1
B
441 444Right-handed 310
Helix 47
AF2
B
445 464Right-handed alpha
Helix 48
AF3
B
474 490Right-handed alpha
Helix 49
AF4
B
490 496Right-handed alpha
Helix 50
AF5
B
503 513Right-handed alpha
Helix 51
AF6
B
516 530Right-handed alpha
Helix 52
AF7
B
535 554Right-handed alpha
Helix 53
AF8
B
564 575Right-handed alpha
Helix 54
AF9
B
575 591Right-handed alpha
Helix 55
AG1
B
593 601Right-handed alpha
Helix 56
AG2
B
605 622Right-handed alpha
Helix 57
AG3
B
636 653Right-handed alpha
Helix 58
AG4
B
658 671Right-handed alpha
Helix 59
AG5
B
675 686Right-handed alpha
Helix 60
AG6
B
696 702Right-handed alpha
Helix 61
AG7
B
708 713Right-handed alpha
Helix 62
AG8
B
722 737Right-handed alpha
Helix 63
AG9
B
738 756Right-handed alpha
Helix 64
AH1
B
764 788Right-handed alpha
Helix 65
AH2
B
789 797Right-handed alpha
Helix 66
AH3
B
799 807Right-handed alpha
Helix 67
AH4
B
810 823Right-handed alpha
Helix 68
AH5
B
861 869Right-handed alpha
Helix 69
AH6
B
878 887Right-handed alpha
Helix 70
AH7
B
900 908Right-handed alpha
Helix 71
AH8
B
929 961Right-handed alpha
Helix 72
AH9
B
972 989Right-handed alpha
Helix 73
AI1
B
989 1006Right-handed alpha
Helix 74
AI2
B
1013 1023Right-handed alpha
Helix 75
AI3
B
1023 1030Right-handed alpha
Helix 76
AI4
B
1034 1055Right-handed alpha
Helix 77
AI5
B
1091 1113Right-handed alpha
Helix 78
AI6
B
1117 1130Right-handed alpha
Helix 79
AI7
B
1138 1154Right-handed alpha
Helix 80
AI8
B
1161 1176Right-handed alpha
Helix 81
AI9
C
32 45Right-handed alpha
Helix 82
AJ1
D
3 7Right-handed 310
Helix 83
AJ2
D
8 21Right-handed alpha
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There are 9 sheets in PDB entry 8R7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
145 148first strand
Strand 2
H
168 171parallel
Strand 3
H
116 119parallel
Strand 4
H
192 196parallel
Strand 5
H
223 228parallel
Strand 6
H
85 88parallel
Strand 7
H
247 249parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
314 317first strand
Strand 2
H
340 343parallel
Strand 3
H
289 293parallel
Strand 4
H
356 361parallel
Strand 5
H
385 391parallel
Strand 6
H
262 268parallel
Strand 7
H
411 413parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
50 54first strand
Strand 2
C
340 345anti-parallel
Strand 3
C
322 324anti-parallel
Strand 4
C
313 315anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 63first strand
Strand 2
C
69 74anti-parallel
Strand 3
C
78 84anti-parallel
Strand 4
C
89 96anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
104 107first strand
Strand 2
C
114 118anti-parallel
Strand 3
C
123 128anti-parallel
Strand 4
C
133 139anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 149first strand
Strand 2
C
155 160anti-parallel
Strand 3
C
164 169anti-parallel
Strand 4
C
175 180anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
185 190first strand
Strand 2
C
196 201anti-parallel
Strand 3
C
205 210anti-parallel
Strand 4
C
215 221anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
227 232first strand
Strand 2
C
238 243anti-parallel
Strand 3
C
248 252anti-parallel
Strand 4
C
258 262anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
269 274first strand
Strand 2
C
280 285anti-parallel
Strand 3
C
289 294anti-parallel
Strand 4
C
303 305anti-parallel
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