Analysis of interatomic Contacts of Structural Units in PDB entry:
8R9R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8R9R entry

There is 1 chain in PDB entry 8R9R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 183ASP 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8R9R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
183 196Right-handed alpha
Helix 2
AA2
A
199 208Right-handed alpha
Helix 3
AA3
A
209 212Right-handed 310
Helix 4
AA4
A
214 231Right-handed alpha
Helix 5
AA5
A
235 241Right-handed alpha
Helix 6
AA6
A
253 268Right-handed alpha
Helix 7
AA7
A
270 272Right-handed 310
Helix 8
AA8
A
285 298Right-handed alpha
Helix 9
AA9
A
306 317Right-handed alpha
Helix 10
AB1
A
336 343Right-handed alpha
Helix 11
AB2
A
344 346Right-handed 310
Helix 12
AB3
A
363 375Right-handed alpha
Helix 13
AB4
A
386 390Right-handed 310
Helix 14
AB5
A
393 403Right-handed alpha
Helix 15
AB6
A
424 434Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8R9R.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 303first strand
Strand 2
A
274 278parallel
Strand 3
A
322 326parallel
Strand 4
A
242 247parallel
Strand 5
A
352 359parallel
Strand 6
A
381 385parallel
Strand 7
A
407 411parallel
Strand 8
A
420 422anti-parallel
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