Analysis of interatomic Contacts of Structural Units in PDB entry:
8RAY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RAY entry

There are 2 chains in PDB entry 8RAY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 20LYS 271
A
 GLY 20THR 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8RAY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
35 50Right-handed alpha
Helix 2
AA2
B
63 68Right-handed alpha
Helix 3
AA3
B
79 86Right-handed alpha
Helix 4
AA4
B
89 93Right-handed 310
Helix 5
AA5
B
110 120Right-handed alpha
Helix 6
AA6
B
123 125Right-handed 310
Helix 7
AA7
B
126 133Right-handed alpha
Helix 8
AA8
B
134 138Right-handed 310
Helix 9
AA9
B
151 161Right-handed alpha
Helix 10
AB1
B
171 177Right-handed alpha
Helix 11
AB2
B
177 192Right-handed alpha
Helix 12
AB3
B
210 225Right-handed alpha
Helix 13
AB4
B
226 228Right-handed 310
Helix 14
AB5
B
236 242Right-handed alpha
Helix 15
AB6
B
243 246Right-handed 310
Helix 16
AB7
B
248 252Right-handed 310
Helix 17
AB8
B
256 271Right-handed alpha
Helix 18
AB9
A
35 50Right-handed alpha
Helix 19
AC1
A
63 68Right-handed alpha
Helix 20
AC2
A
79 86Right-handed alpha
Helix 21
AC3
A
89 94Right-handed 310
Helix 22
AC4
A
110 120Right-handed alpha
Helix 23
AC5
A
126 133Right-handed alpha
Helix 24
AC6
A
134 136Right-handed 310
Helix 25
AC7
A
151 161Right-handed alpha
Helix 26
AC8
A
171 190Right-handed alpha
Helix 27
AC9
A
210 225Right-handed alpha
Helix 28
AD1
A
226 228Right-handed 310
Helix 29
AD2
A
236 242Right-handed alpha
Helix 30
AD3
A
243 246Right-handed 310
Helix 31
AD4
A
248 252Right-handed 310
Helix 32
AD5
A
256 272Right-handed alpha
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There are 2 sheets in PDB entry 8RAY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 96first strand
Strand 2
B
102 105anti-parallel
Strand 3
B
54 58parallel
Strand 4
B
141 145parallel
Strand 5
B
23 27parallel
Strand 6
B
163 169parallel
Strand 7
B
197 204parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
102 105anti-parallel
Strand 3
A
54 58parallel
Strand 4
A
141 145parallel
Strand 5
A
23 27parallel
Strand 6
A
163 169parallel
Strand 7
A
197 204parallel
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