Analysis of interatomic Contacts of Structural Units in PDB entry:
8RB4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RB4 entry

There are 5 chains in PDB entry 8RB4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 157GLU 336
D
 LEU 157GLU 336
F
 LEU 157GLU 336
I
 LEU 157GLU 336
J
 LEU 157GLU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8RB4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
180 194Right-handed alpha
Helix 2
AA2
A
198 208Right-handed alpha
Helix 3
AA3
A
209 211Right-handed 310
Helix 4
AA4
A
212 225Right-handed alpha
Helix 5
AA5
A
229 242Right-handed alpha
Helix 6
AA6
A
246 256Right-handed alpha
Helix 7
AA7
A
264 282Right-handed alpha
Helix 8
AA8
A
286 288Right-handed 310
Helix 9
AA9
A
289 302Right-handed alpha
Helix 10
AB1
A
305 318Right-handed alpha
Helix 11
AB2
A
323 336Right-handed alpha
Helix 12
AB3
D
180 194Right-handed alpha
Helix 13
AB4
D
198 208Right-handed alpha
Helix 14
AB5
D
209 211Right-handed 310
Helix 15
AB6
D
212 225Right-handed alpha
Helix 16
AB7
D
229 242Right-handed alpha
Helix 17
AB8
D
248 256Right-handed alpha
Helix 18
AB9
D
264 282Right-handed alpha
Helix 19
AC1
D
286 288Right-handed 310
Helix 20
AC2
D
289 302Right-handed alpha
Helix 21
AC3
D
306 319Right-handed alpha
Helix 22
AC4
D
323 336Right-handed alpha
Helix 23
AC5
F
180 194Right-handed alpha
Helix 24
AC6
F
198 208Right-handed alpha
Helix 25
AC7
F
209 211Right-handed 310
Helix 26
AC8
F
212 225Right-handed alpha
Helix 27
AC9
F
229 242Right-handed alpha
Helix 28
AD1
F
246 257Right-handed alpha
Helix 29
AD2
F
264 282Right-handed alpha
Helix 30
AD3
F
286 288Right-handed 310
Helix 31
AD4
F
289 302Right-handed alpha
Helix 32
AD5
F
306 319Right-handed alpha
Helix 33
AD6
F
323 336Right-handed alpha
Helix 34
AD7
I
180 194Right-handed alpha
Helix 35
AD8
I
198 208Right-handed alpha
Helix 36
AD9
I
209 211Right-handed 310
Helix 37
AE1
I
212 225Right-handed alpha
Helix 38
AE2
I
229 242Right-handed alpha
Helix 39
AE3
I
246 256Right-handed alpha
Helix 40
AE4
I
264 282Right-handed alpha
Helix 41
AE5
I
286 288Right-handed 310
Helix 42
AE6
I
289 302Right-handed alpha
Helix 43
AE7
I
305 319Right-handed alpha
Helix 44
AE8
I
323 336Right-handed alpha
Helix 45
AE9
J
180 194Right-handed alpha
Helix 46
AF1
J
198 208Right-handed alpha
Helix 47
AF2
J
209 211Right-handed 310
Helix 48
AF3
J
212 225Right-handed alpha
Helix 49
AF4
J
229 242Right-handed alpha
Helix 50
AF5
J
246 257Right-handed alpha
Helix 51
AF6
J
264 282Right-handed alpha
Helix 52
AF7
J
286 288Right-handed 310
Helix 53
AF8
J
289 302Right-handed alpha
Helix 54
AF9
J
306 317Right-handed alpha
Helix 55
AG1
J
323 335Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8RB4.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 164first strand
Strand 2
D
161 164parallel
Strand 3
F
160 164parallel
Strand 4
I
160 164parallel
Strand 5
J
159 164parallel
Strand 6
A
160 164parallel
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