Analysis of interatomic Contacts of Structural Units in PDB entry:
8RB5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RB5 entry

There are 3 chains in PDB entry 8RB5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 157GLU 336
B
 LEU 157GLU 336
C
 LEU 157GLU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8RB5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
180 194Right-handed alpha
Helix 2
AA2
A
198 208Right-handed alpha
Helix 3
AA3
A
211 225Right-handed alpha
Helix 4
AA4
A
229 242Right-handed alpha
Helix 5
AA5
A
246 256Right-handed alpha
Helix 6
AA6
A
264 282Right-handed alpha
Helix 7
AA7
A
286 288Right-handed 310
Helix 8
AA8
A
289 302Right-handed alpha
Helix 9
AA9
A
305 318Right-handed alpha
Helix 10
AB1
A
323 333Right-handed alpha
Helix 11
AB2
B
180 194Right-handed alpha
Helix 12
AB3
B
198 208Right-handed alpha
Helix 13
AB4
B
211 225Right-handed alpha
Helix 14
AB5
B
229 242Right-handed alpha
Helix 15
AB6
B
246 256Right-handed alpha
Helix 16
AB7
B
264 282Right-handed alpha
Helix 17
AB8
B
286 288Right-handed 310
Helix 18
AB9
B
289 302Right-handed alpha
Helix 19
AC1
B
305 318Right-handed alpha
Helix 20
AC2
B
323 333Right-handed alpha
Helix 21
AC3
C
180 194Right-handed alpha
Helix 22
AC4
C
198 208Right-handed alpha
Helix 23
AC5
C
211 225Right-handed alpha
Helix 24
AC6
C
229 242Right-handed alpha
Helix 25
AC7
C
246 256Right-handed alpha
Helix 26
AC8
C
264 282Right-handed alpha
Helix 27
AC9
C
286 288Right-handed 310
Helix 28
AD1
C
289 302Right-handed alpha
Helix 29
AD2
C
305 318Right-handed alpha
Helix 30
AD3
C
323 333Right-handed alpha
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There are no sheets in PDB entry 8RB5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il