Analysis of interatomic Contacts of Structural Units in PDB entry:
8RBH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RBH entry

There are 4 chains in PDB entry 8RBH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 280GLU 567
B
 ASN 280GLU 567
C
 GLY 15PRO 22
D
 GLN 16PRO 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8RBH

There are 13 sheets in PDB entry 8RBH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 312first strand
Strand 2
A
299 303anti-parallel
Strand 3
A
281 286anti-parallel
Strand 4
A
561 566anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 290first strand
Strand 2
A
557 558anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 327first strand
Strand 2
A
330 334anti-parallel
Strand 3
A
346 350anti-parallel
Strand 4
A
359 362anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 377first strand
Strand 2
A
380 384anti-parallel
Strand 3
A
395 399anti-parallel
Strand 4
A
406 411anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 424first strand
Strand 2
A
427 434anti-parallel
Strand 3
A
439 446anti-parallel
Strand 4
A
453 456anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 471first strand
Strand 2
A
474 478anti-parallel
Strand 3
A
490 494anti-parallel
Strand 4
A
499 503anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
514 518first strand
Strand 2
A
521 525anti-parallel
Strand 3
A
537 541anti-parallel
Strand 4
A
546 551anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
308 312first strand
Strand 2
B
299 303anti-parallel
Strand 3
B
281 286anti-parallel
Strand 4
B
561 566anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 290first strand
Strand 2
B
547 558anti-parallel
Strand 3
B
534 540anti-parallel
Strand 4
B
521 525anti-parallel
Strand 5
B
514 518anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 327first strand
Strand 2
B
330 334anti-parallel
Strand 3
B
346 350anti-parallel
Strand 4
B
358 362anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 377first strand
Strand 2
B
380 384anti-parallel
Strand 3
B
396 399anti-parallel
Strand 4
B
406 408anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
420 424first strand
Strand 2
B
427 434anti-parallel
Strand 3
B
439 446anti-parallel
Strand 4
B
453 456anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
467 471first strand
Strand 2
B
474 481anti-parallel
Strand 3
B
486 494anti-parallel
Strand 4
B
499 503anti-parallel
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