Analysis of interatomic Contacts of Structural Units in PDB entry:
8RCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RCZ entry

There are 2 chains in PDB entry 8RCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 13GLN 399
B
 PHE 12GLN 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8RCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 37Right-handed alpha
Helix 2
AA2
A
53 68Right-handed alpha
Helix 3
AA3
A
87 103Right-handed alpha
Helix 4
AA4
A
116 131Right-handed alpha
Helix 5
AA5
A
187 199Right-handed alpha
Helix 6
AA6
A
200 213Right-handed alpha
Helix 7
AA7
A
230 235Right-handed alpha
Helix 8
AA8
A
240 260Right-handed alpha
Helix 9
AA9
A
285 300Right-handed alpha
Helix 10
AB1
A
305 317Right-handed alpha
Helix 11
AB2
A
339 352Right-handed alpha
Helix 12
AB3
A
357 362Right-handed alpha
Helix 13
AB4
A
363 374Right-handed alpha
Helix 14
AB5
B
18 37Right-handed alpha
Helix 15
AB6
B
53 68Right-handed alpha
Helix 16
AB7
B
87 103Right-handed alpha
Helix 17
AB8
B
116 131Right-handed alpha
Helix 18
AB9
B
187 199Right-handed alpha
Helix 19
AC1
B
200 213Right-handed alpha
Helix 20
AC2
B
240 260Right-handed alpha
Helix 21
AC3
B
261 264Right-handed 310
Helix 22
AC4
B
279 283Right-handed 310
Helix 23
AC5
B
285 300Right-handed alpha
Helix 24
AC6
B
305 317Right-handed alpha
Helix 25
AC7
B
334 338Right-handed 310
Helix 26
AC8
B
339 353Right-handed alpha
Helix 27
AC9
B
357 362Right-handed alpha
Helix 28
AD1
B
363 375Right-handed alpha
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There are 6 sheets in PDB entry 8RCZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 111first strand
Strand 2
A
70 75parallel
Strand 3
A
45 49parallel
Strand 4
A
134 139parallel
Strand 5
A
216 226parallel
Strand 6
A
266 271parallel
Strand 7
A
331 332parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
154 156anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 172first strand
Strand 2
A
177 183anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 111first strand
Strand 2
B
70 75parallel
Strand 3
B
45 49parallel
Strand 4
B
134 139parallel
Strand 5
B
216 226parallel
Strand 6
B
266 271parallel
Strand 7
B
331 332parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 147first strand
Strand 2
B
154 156anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 172first strand
Strand 2
B
177 183anti-parallel
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