Analysis of interatomic Contacts of Structural Units in PDB entry:
8REV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8REV entry

There are 5 chains in PDB entry 8REV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 754
D
 GLY 99PRO 287
E
 C 1 A 18
B
 A 79 C 82
B
 C 96 G 98
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 8REV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 35Right-handed alpha
Helix 2
AA2
A
47 63Right-handed alpha
Helix 3
AA3
A
75 98Right-handed alpha
Helix 4
AA4
A
110 115Right-handed alpha
Helix 5
AA5
A
117 123Right-handed alpha
Helix 6
AA6
A
125 137Right-handed alpha
Helix 7
AA7
A
139 148Right-handed alpha
Helix 8
AA8
A
155 160Right-handed alpha
Helix 9
AA9
A
161 163Right-handed 310
Helix 10
AB1
A
175 186Right-handed alpha
Helix 11
AB2
A
189 197Right-handed alpha
Helix 12
AB3
A
208 213Right-handed alpha
Helix 13
AB4
A
213 220Right-handed alpha
Helix 14
AB5
A
237 246Right-handed alpha
Helix 15
AB6
A
252 274Right-handed alpha
Helix 16
AB7
A
321 344Right-handed alpha
Helix 17
AB8
A
352 363Right-handed alpha
Helix 18
AB9
A
367 384Right-handed alpha
Helix 19
AC1
A
392 409Right-handed alpha
Helix 20
AC2
A
439 450Right-handed alpha
Helix 21
AC3
A
464 471Right-handed alpha
Helix 22
AC4
A
512 530Right-handed alpha
Helix 23
AC5
A
540 554Right-handed alpha
Helix 24
AC6
A
555 563Right-handed alpha
Helix 25
AC7
A
572 590Right-handed alpha
Helix 26
AC8
A
629 644Right-handed alpha
Helix 27
AC9
A
646 664Right-handed alpha
Helix 28
AD1
A
681 685Right-handed 310
Helix 29
AD2
A
691 698Right-handed alpha
Helix 30
AD3
A
699 703Right-handed 310
Helix 31
AD4
A
707 723Right-handed alpha
Helix 32
AD5
A
737 754Right-handed alpha
Helix 33
AD6
D
122 142Right-handed alpha
Helix 34
AD7
D
166 180Right-handed alpha
Helix 35
AD8
D
188 200Right-handed alpha
Helix 36
AD9
D
225 236Right-handed alpha
Helix 37
AE1
D
249 260Right-handed alpha
Helix 38
AE2
D
263 265Right-handed 310
Helix 39
AE3
D
272 283Right-handed alpha
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There are 5 sheets in PDB entry 8REV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
9 11anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
453 456parallel
Strand 3
A
229 233parallel
Strand 4
A
69 73parallel
Strand 5
A
203 207parallel
Strand 6
A
104 108parallel
Strand 7
A
172 174parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 251first strand
Strand 2
A
428 436anti-parallel
Strand 3
A
413 420anti-parallel
Strand 4
A
349 351anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
564 568first strand
Strand 2
A
592 598parallel
Strand 3
A
533 538parallel
Strand 4
A
614 619parallel
Strand 5
A
675 679parallel
Strand 6
A
492 496parallel
Strand 7
A
705 706parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
146 152first strand
Strand 2
D
103 109parallel
Strand 3
D
210 215parallel
Strand 4
D
239 244parallel
Strand 5
D
267 269parallel
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