Analysis of interatomic Contacts of Structural Units in PDB entry:
8RG4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RG4 entry

There is 1 chain in PDB entry 8RG4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 37ARG 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8RG4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 73Right-handed alpha
Helix 2
AA2
A
83 88Right-handed alpha
Helix 3
AA3
A
89 105Right-handed alpha
Helix 4
AA4
A
123 130Right-handed alpha
Helix 5
AA5
A
131 136Right-handed 310
Helix 6
AA6
A
158 174Right-handed alpha
Helix 7
AA7
A
185 191Right-handed alpha
Helix 8
AA8
A
193 199Right-handed alpha
Helix 9
AA9
A
199 222Right-handed alpha
Helix 10
AB1
A
263 280Right-handed alpha
Helix 11
AB2
A
296 301Right-handed alpha
Helix 12
AB3
A
303 315Right-handed alpha
Helix 13
AB4
A
315 326Right-handed alpha
Helix 14
AB5
A
348 352Right-handed 310
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There are 4 sheets in PDB entry 8RG4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
75 78parallel
Strand 3
A
109 113parallel
Strand 4
A
180 183parallel
Strand 5
A
226 234parallel
Strand 6
A
239 240anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
75 78parallel
Strand 3
A
109 113parallel
Strand 4
A
180 183parallel
Strand 5
A
226 234parallel
Strand 6
A
250 253parallel
Strand 7
A
283 289parallel
Strand 8
A
330 335parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
151 152anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 365first strand
Strand 2
A
368 373anti-parallel
Strand 3
A
376 381anti-parallel
Strand 4
A
386 391anti-parallel
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