Analysis of interatomic Contacts of Structural Units in PDB entry:
8RG7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RG7 entry

There are 2 chains in PDB entry 8RG7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 10ASN 581
B
 SER 10ASN 581
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 8RG7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 22Right-handed alpha
Helix 2
AA2
A
25 45Right-handed alpha
Helix 3
AA3
A
45 60Right-handed alpha
Helix 4
AA4
A
60 110Right-handed alpha
Helix 5
AA5
A
112 117Right-handed alpha
Helix 6
AA6
A
119 140Right-handed alpha
Helix 7
AA7
A
140 163Right-handed alpha
Helix 8
AA8
A
166 179Right-handed alpha
Helix 9
AA9
A
180 210Right-handed alpha
Helix 10
AB1
A
212 219Right-handed alpha
Helix 11
AB2
A
221 275Right-handed alpha
Helix 12
AB3
A
279 295Right-handed alpha
Helix 13
AB4
A
295 322Right-handed alpha
Helix 14
AB5
A
326 331Right-handed alpha
Helix 15
AB6
A
379 388Right-handed alpha
Helix 16
AB7
A
404 408Right-handed 310
Helix 17
AB8
A
409 416Right-handed alpha
Helix 18
AB9
A
431 437Right-handed alpha
Helix 19
AC1
A
447 455Right-handed alpha
Helix 20
AC2
A
457 462Right-handed alpha
Helix 21
AC3
A
483 496Right-handed alpha
Helix 22
AC4
A
512 526Right-handed alpha
Helix 23
AC5
A
536 541Right-handed alpha
Helix 24
AC6
A
559 567Right-handed alpha
Helix 25
AC7
A
568 581Right-handed alpha
Helix 26
AC8
B
11 22Right-handed alpha
Helix 27
AC9
B
25 60Right-handed alpha
Helix 28
AD1
B
60 110Right-handed alpha
Helix 29
AD2
B
112 118Right-handed alpha
Helix 30
AD3
B
120 140Right-handed alpha
Helix 31
AD4
B
140 163Right-handed alpha
Helix 32
AD5
B
166 179Right-handed alpha
Helix 33
AD6
B
180 210Right-handed alpha
Helix 34
AD7
B
212 219Right-handed alpha
Helix 35
AD8
B
221 249Right-handed alpha
Helix 36
AD9
B
250 275Right-handed alpha
Helix 37
AE1
B
279 322Right-handed alpha
Helix 38
AE2
B
325 329Right-handed 310
Helix 39
AE3
B
379 388Right-handed alpha
Helix 40
AE4
B
401 407Right-handed alpha
Helix 41
AE5
B
430 438Right-handed alpha
Helix 42
AE6
B
441 447Right-handed 310
Helix 43
AE7
B
448 455Right-handed alpha
Helix 44
AE8
B
456 462Right-handed alpha
Helix 45
AE9
B
480 494Right-handed alpha
Helix 46
AF1
B
510 525Right-handed alpha
Helix 47
AF2
B
537 544Right-handed alpha
Helix 48
AF3
B
559 567Right-handed alpha
Helix 49
AF4
B
571 581Right-handed alpha
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There are 6 sheets in PDB entry 8RG7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 364first strand
Strand 2
A
341 344anti-parallel
Strand 3
A
397 399anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 421first strand
Strand 2
A
499 503parallel
Strand 3
A
529 533parallel
Strand 4
A
369 373parallel
Strand 5
A
545 550parallel
Strand 6
A
553 556anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 430first strand
Strand 2
A
471 473anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 365first strand
Strand 2
B
341 346anti-parallel
Strand 3
B
398 399anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 373first strand
Strand 2
B
547 550parallel
Strand 3
B
553 555anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
499 503first strand
Strand 2
B
529 533parallel
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