Analysis of interatomic Contacts of Structural Units in PDB entry:
8RH1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RH1 entry

There are 9 chains in PDB entry 8RH1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 103	ALA 719
D	THR 22	SER 141
E	ILE 21	LYS 131
H	THR 22	SER 141
F	THR 22	SER 141
L	ILE 21	LYS 131
G	ILE 21	LYS 131
B	ALA 103	ALA 719
C	ALA 103	ALA 719

There are 41 helices in PDB entry 8RH1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	185	191	Right-handed alpha
Helix 2	AA2	A	217	219	Right-handed 310
Helix 3	AA3	A	307	309	Right-handed 310
Helix 4	AA4	A	395	399	Right-handed 310
Helix 5	AA5	A	402	421	Right-handed alpha
Helix 6	AA6	A	495	540	Right-handed alpha
Helix 7	AA7	A	540	550	Right-handed alpha
Helix 8	AA8	A	571	573	Right-handed 310
Helix 9	AA9	A	654	658	Right-handed 310
Helix 10	AB1	A	684	692	Right-handed alpha
Helix 11	AB2	A	695	705	Right-handed alpha
Helix 12	AB3	A	705	711	Right-handed alpha
Helix 13	AB4	E	103	107	Right-handed 310
Helix 14	AB5	H	107	111	Right-handed 310
Helix 15	AB6	F	107	111	Right-handed 310
Helix 16	AB7	G	103	107	Right-handed 310
Helix 17	AB8	B	185	190	Right-handed alpha
Helix 18	AB9	B	192	197	Right-handed alpha
Helix 19	AC1	B	217	219	Right-handed 310
Helix 20	AC2	B	307	309	Right-handed 310
Helix 21	AC3	B	395	399	Right-handed 310
Helix 22	AC4	B	402	421	Right-handed alpha
Helix 23	AC5	B	495	540	Right-handed alpha
Helix 24	AC6	B	540	550	Right-handed alpha
Helix 25	AC7	B	571	573	Right-handed 310
Helix 26	AC8	B	654	658	Right-handed 310
Helix 27	AC9	B	684	691	Right-handed alpha
Helix 28	AD1	B	695	704	Right-handed alpha
Helix 29	AD2	B	705	711	Right-handed alpha
Helix 30	AD3	C	185	192	Right-handed alpha
Helix 31	AD4	C	217	219	Right-handed 310
Helix 32	AD5	C	307	309	Right-handed 310
Helix 33	AD6	C	395	399	Right-handed 310
Helix 34	AD7	C	403	420	Right-handed alpha
Helix 35	AD8	C	495	540	Right-handed alpha
Helix 36	AD9	C	540	550	Right-handed alpha
Helix 37	AE1	C	571	573	Right-handed 310
Helix 38	AE2	C	654	658	Right-handed 310
Helix 39	AE3	C	684	692	Right-handed alpha
Helix 40	AE4	C	695	705	Right-handed alpha
Helix 41	AE5	C	705	711	Right-handed alpha

There are 50 sheets in PDB entry 8RH1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	568	570	first strand
Strand 2	A	105	107	anti-parallel
Strand 3	A	616	618	parallel
Strand 4	A	607	611	anti-parallel
Strand 5	A	595	598	anti-parallel
Strand 6	A	575	577	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	553	557	first strand
Strand 2	A	562	566	anti-parallel
Strand 3	A	116	119	anti-parallel
Strand 4	C	659	661	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	364	first strand
Strand 2	A	137	144	anti-parallel
Strand 3	A	440	449	anti-parallel
Strand 4	A	425	427	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	364	first strand
Strand 2	A	137	144	anti-parallel
Strand 3	A	440	449	anti-parallel
Strand 4	A	432	436	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	183	first strand
Strand 2	A	149	167	anti-parallel
Strand 3	A	255	272	anti-parallel
Strand 4	A	279	281	anti-parallel
Strand 5	A	286	287	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	228	first strand
Strand 2	A	238	240	anti-parallel
Strand 3	A	255	272	anti-parallel
Strand 4	A	149	167	anti-parallel
Strand 5	A	343	347	anti-parallel
Strand 6	A	332	338	anti-parallel
Strand 7	A	311	317	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	200	first strand
Strand 2	A	223	225	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	202	207	first strand
Strand 2	A	210	215	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	372	first strand
Strand 2	A	375	380	anti-parallel
Strand 3	A	385	390	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	589	591	first strand
Strand 2	A	624	626	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	632	637	first strand
Strand 2	A	640	645	anti-parallel
Strand 3	A	648	653	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	659	661	first strand
Strand 2	B	116	119	parallel
Strand 3	B	562	566	anti-parallel
Strand 4	B	553	557	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	31	first strand
Strand 2	D	135	139	parallel
Strand 3	D	112	119	anti-parallel
Strand 4	D	54	60	anti-parallel
Strand 5	D	67	73	anti-parallel
Strand 6	D	78	80	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	38	first strand
Strand 2	D	98	103	anti-parallel
Strand 3	D	41	42	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	38	first strand
Strand 2	D	98	103	anti-parallel
Strand 3	D	88	93	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	23	26	first strand
Strand 2	E	38	44	anti-parallel
Strand 3	E	94	99	anti-parallel
Strand 4	E	86	91	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	31	first strand
Strand 2	E	126	129	parallel
Strand 3	E	108	114	anti-parallel
Strand 4	E	57	62	anti-parallel
Strand 5	E	69	73	anti-parallel
Strand 6	E	77	78	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	31	first strand
Strand 2	E	126	129	parallel
Strand 3	E	108	114	anti-parallel
Strand 4	E	121	122	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	24	26	first strand
Strand 2	H	37	42	anti-parallel
Strand 3	H	98	103	anti-parallel
Strand 4	H	88	93	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	31	first strand
Strand 2	H	135	139	parallel
Strand 3	H	112	119	anti-parallel
Strand 4	H	54	60	anti-parallel
Strand 5	H	67	73	anti-parallel
Strand 6	H	78	80	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	31	first strand
Strand 2	F	135	139	parallel
Strand 3	F	112	119	anti-parallel
Strand 4	F	54	60	anti-parallel
Strand 5	F	67	73	anti-parallel
Strand 6	F	78	80	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	37	38	first strand
Strand 2	F	98	103	anti-parallel
Strand 3	F	41	42	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	37	38	first strand
Strand 2	F	98	103	anti-parallel
Strand 3	F	88	93	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	23	26	first strand
Strand 2	L	38	44	anti-parallel
Strand 3	L	94	99	anti-parallel
Strand 4	L	86	91	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	29	32	first strand
Strand 2	L	126	130	parallel
Strand 3	L	108	114	anti-parallel
Strand 4	L	57	62	anti-parallel
Strand 5	L	69	73	anti-parallel
Strand 6	L	77	78	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	29	32	first strand
Strand 2	L	126	130	parallel
Strand 3	L	108	114	anti-parallel
Strand 4	L	121	122	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	23	26	first strand
Strand 2	G	38	44	anti-parallel
Strand 3	G	94	99	anti-parallel
Strand 4	G	86	91	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	32	first strand
Strand 2	G	126	130	parallel
Strand 3	G	109	114	anti-parallel
Strand 4	G	57	62	anti-parallel
Strand 5	G	69	73	anti-parallel
Strand 6	G	77	78	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	32	first strand
Strand 2	G	126	130	parallel
Strand 3	G	109	114	anti-parallel
Strand 4	G	121	122	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	568	570	first strand
Strand 2	B	105	107	anti-parallel
Strand 3	B	616	618	parallel
Strand 4	B	607	611	anti-parallel
Strand 5	B	595	598	anti-parallel
Strand 6	B	575	577	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	364	first strand
Strand 2	B	137	144	anti-parallel
Strand 3	B	440	449	anti-parallel
Strand 4	B	425	427	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	364	first strand
Strand 2	B	137	144	anti-parallel
Strand 3	B	440	449	anti-parallel
Strand 4	B	432	436	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	183	first strand
Strand 2	B	149	167	anti-parallel
Strand 3	B	255	272	anti-parallel
Strand 4	B	279	281	anti-parallel
Strand 5	B	286	287	anti-parallel

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There are 7 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	228	first strand
Strand 2	B	238	240	anti-parallel
Strand 3	B	255	272	anti-parallel
Strand 4	B	149	167	anti-parallel
Strand 5	B	343	347	anti-parallel
Strand 6	B	332	338	anti-parallel
Strand 7	B	311	317	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	200	first strand
Strand 2	B	223	225	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	206	first strand
Strand 2	B	211	215	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	372	first strand
Strand 2	B	375	380	anti-parallel
Strand 3	B	385	390	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	589	591	first strand
Strand 2	B	624	626	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	632	637	first strand
Strand 2	B	640	645	anti-parallel
Strand 3	B	649	653	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	659	661	first strand
Strand 2	C	116	119	parallel
Strand 3	C	562	566	anti-parallel
Strand 4	C	553	557	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	568	570	first strand
Strand 2	C	105	107	anti-parallel
Strand 3	C	616	618	parallel
Strand 4	C	607	611	anti-parallel
Strand 5	C	595	598	anti-parallel
Strand 6	C	575	577	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	364	first strand
Strand 2	C	137	144	anti-parallel
Strand 3	C	440	449	anti-parallel
Strand 4	C	425	427	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	364	first strand
Strand 2	C	137	144	anti-parallel
Strand 3	C	440	449	anti-parallel
Strand 4	C	432	436	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	183	first strand
Strand 2	C	149	167	anti-parallel
Strand 3	C	255	272	anti-parallel
Strand 4	C	279	281	anti-parallel
Strand 5	C	286	287	anti-parallel

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There are 7 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	228	first strand
Strand 2	C	238	240	anti-parallel
Strand 3	C	255	272	anti-parallel
Strand 4	C	149	167	anti-parallel
Strand 5	C	343	347	anti-parallel
Strand 6	C	332	338	anti-parallel
Strand 7	C	311	317	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	200	first strand
Strand 2	C	223	225	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	202	206	first strand
Strand 2	C	211	215	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	372	first strand
Strand 2	C	375	380	anti-parallel
Strand 3	C	385	390	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	589	591	first strand
Strand 2	C	624	626	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	632	637	first strand
Strand 2	C	640	645	anti-parallel
Strand 3	C	649	653	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RH1

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RH1