Analysis of interatomic Contacts of Structural Units in PDB entry:
8RH2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RH2 entry

There are 9 chains in PDB entry 8RH2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 103	ALA 719
B	ALA 103	ALA 719
C	ALA 103	ALA 719
H	VAL 7	VAL 125
L	ALA 2	LEU 106
E	ALA 2	LEU 106
G	ALA 2	LEU 106
D	VAL 7	VAL 125
F	VAL 7	VAL 125

There are 51 helices in PDB entry 8RH2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	185	192	Right-handed alpha
Helix 2	AA2	A	217	219	Right-handed 310
Helix 3	AA3	A	298	302	Right-handed 310
Helix 4	AA4	A	307	309	Right-handed 310
Helix 5	AA5	A	395	399	Right-handed 310
Helix 6	AA6	A	402	420	Right-handed alpha
Helix 7	AA7	A	495	540	Right-handed alpha
Helix 8	AA8	A	540	550	Right-handed alpha
Helix 9	AA9	A	571	573	Right-handed 310
Helix 10	AB1	A	654	658	Right-handed 310
Helix 11	AB2	A	684	691	Right-handed alpha
Helix 12	AB3	A	695	704	Right-handed alpha
Helix 13	AB4	A	705	711	Right-handed alpha
Helix 14	AB5	B	185	190	Right-handed alpha
Helix 15	AB6	B	217	219	Right-handed 310
Helix 16	AB7	B	298	302	Right-handed 310
Helix 17	AB8	B	307	309	Right-handed 310
Helix 18	AB9	B	395	399	Right-handed 310
Helix 19	AC1	B	402	421	Right-handed alpha
Helix 20	AC2	B	495	540	Right-handed alpha
Helix 21	AC3	B	540	550	Right-handed alpha
Helix 22	AC4	B	571	573	Right-handed 310
Helix 23	AC5	B	656	658	Right-handed 310
Helix 24	AC6	B	684	691	Right-handed alpha
Helix 25	AC7	B	695	704	Right-handed alpha
Helix 26	AC8	B	705	711	Right-handed alpha
Helix 27	AC9	C	185	190	Right-handed alpha
Helix 28	AD1	C	217	219	Right-handed 310
Helix 29	AD2	C	298	302	Right-handed 310
Helix 30	AD3	C	307	309	Right-handed 310
Helix 31	AD4	C	395	399	Right-handed 310
Helix 32	AD5	C	404	420	Right-handed alpha
Helix 33	AD6	C	495	540	Right-handed alpha
Helix 34	AD7	C	540	550	Right-handed alpha
Helix 35	AD8	C	571	573	Right-handed 310
Helix 36	AD9	C	654	658	Right-handed 310
Helix 37	AE1	C	684	691	Right-handed alpha
Helix 38	AE2	C	695	705	Right-handed alpha
Helix 39	AE3	C	705	711	Right-handed alpha
Helix 40	AE4	H	67	70	Right-handed 310
Helix 41	AE5	H	92	95	Right-handed 310
Helix 42	AE6	L	26	30	Right-handed 310
Helix 43	AE7	L	78	82	Right-handed 310
Helix 44	AE8	E	26	30	Right-handed 310
Helix 45	AE9	E	78	82	Right-handed 310
Helix 46	AF1	G	26	30	Right-handed 310
Helix 47	AF2	G	78	82	Right-handed 310
Helix 48	AF3	D	67	70	Right-handed 310
Helix 49	AF4	D	92	95	Right-handed 310
Helix 50	AF5	F	67	70	Right-handed 310
Helix 51	AF6	F	92	95	Right-handed 310

There are 49 sheets in PDB entry 8RH2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	568	570	first strand
Strand 2	A	105	107	anti-parallel
Strand 3	A	616	618	parallel
Strand 4	A	607	611	anti-parallel
Strand 5	A	595	598	anti-parallel
Strand 6	A	575	577	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	553	557	first strand
Strand 2	A	562	566	anti-parallel
Strand 3	A	116	119	anti-parallel
Strand 4	C	659	661	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	367	372	anti-parallel
Strand 3	A	375	380	anti-parallel
Strand 4	A	385	390	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	364	first strand
Strand 2	A	137	144	anti-parallel
Strand 3	A	440	449	anti-parallel
Strand 4	A	425	427	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	364	first strand
Strand 2	A	137	144	anti-parallel
Strand 3	A	440	449	anti-parallel
Strand 4	A	432	436	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	183	first strand
Strand 2	A	149	167	anti-parallel
Strand 3	A	255	272	anti-parallel
Strand 4	A	279	280	anti-parallel
Strand 5	A	286	287	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	228	first strand
Strand 2	A	238	240	anti-parallel
Strand 3	A	255	272	anti-parallel
Strand 4	A	149	167	anti-parallel
Strand 5	A	343	347	anti-parallel
Strand 6	A	332	338	anti-parallel
Strand 7	A	311	317	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	200	first strand
Strand 2	A	223	225	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	202	207	first strand
Strand 2	A	210	215	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	589	591	first strand
Strand 2	A	624	626	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	632	637	first strand
Strand 2	A	640	645	anti-parallel
Strand 3	A	648	653	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	659	661	first strand
Strand 2	B	116	119	parallel
Strand 3	B	562	566	anti-parallel
Strand 4	B	553	557	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	568	570	first strand
Strand 2	B	105	107	anti-parallel
Strand 3	B	616	618	parallel
Strand 4	B	607	611	anti-parallel
Strand 5	B	595	598	anti-parallel
Strand 6	B	575	577	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	364	first strand
Strand 2	B	137	144	anti-parallel
Strand 3	B	440	449	anti-parallel
Strand 4	B	425	427	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	364	first strand
Strand 2	B	137	144	anti-parallel
Strand 3	B	440	449	anti-parallel
Strand 4	B	432	436	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	183	first strand
Strand 2	B	149	167	anti-parallel
Strand 3	B	255	272	anti-parallel
Strand 4	B	279	280	anti-parallel
Strand 5	B	286	287	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	228	first strand
Strand 2	B	238	240	anti-parallel
Strand 3	B	255	272	anti-parallel
Strand 4	B	149	167	anti-parallel
Strand 5	B	343	347	anti-parallel
Strand 6	B	332	338	anti-parallel
Strand 7	B	311	317	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	200	first strand
Strand 2	B	223	225	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	207	first strand
Strand 2	B	210	215	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	372	first strand
Strand 2	B	375	380	anti-parallel
Strand 3	B	385	390	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	589	591	first strand
Strand 2	B	624	626	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	632	637	first strand
Strand 2	B	640	645	anti-parallel
Strand 3	B	648	654	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	659	661	first strand
Strand 2	C	116	119	parallel
Strand 3	C	562	566	anti-parallel
Strand 4	C	553	557	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	568	570	first strand
Strand 2	C	105	107	anti-parallel
Strand 3	C	616	618	parallel
Strand 4	C	607	611	anti-parallel
Strand 5	C	595	598	anti-parallel
Strand 6	C	575	576	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	364	first strand
Strand 2	C	137	144	anti-parallel
Strand 3	C	440	449	anti-parallel
Strand 4	C	425	427	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	364	first strand
Strand 2	C	137	144	anti-parallel
Strand 3	C	440	449	anti-parallel
Strand 4	C	432	436	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	183	first strand
Strand 2	C	149	167	anti-parallel
Strand 3	C	255	272	anti-parallel
Strand 4	C	279	281	anti-parallel
Strand 5	C	286	287	anti-parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	228	first strand
Strand 2	C	238	240	anti-parallel
Strand 3	C	255	272	anti-parallel
Strand 4	C	149	167	anti-parallel
Strand 5	C	343	347	anti-parallel
Strand 6	C	332	338	anti-parallel
Strand 7	C	311	317	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	200	first strand
Strand 2	C	223	225	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	202	206	first strand
Strand 2	C	211	215	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	372	first strand
Strand 2	C	375	380	anti-parallel
Strand 3	C	385	390	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	589	591	first strand
Strand 2	C	624	626	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	632	637	first strand
Strand 2	C	640	645	anti-parallel
Strand 3	C	648	653	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	8	11	first strand
Strand 2	H	22	30	anti-parallel
Strand 3	H	83	89	anti-parallel
Strand 4	H	73	78	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	16	first strand
Strand 2	H	121	124	parallel
Strand 3	H	97	103	anti-parallel
Strand 4	H	39	45	anti-parallel
Strand 5	H	50	56	anti-parallel
Strand 6	H	63	65	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	101	105	parallel
Strand 3	L	84	90	anti-parallel
Strand 4	L	33	37	anti-parallel
Strand 5	L	44	47	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	101	105	parallel
Strand 3	L	84	90	anti-parallel
Strand 4	L	95	97	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	18	23	first strand
Strand 2	L	69	74	anti-parallel
Strand 3	L	61	66	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	12	first strand
Strand 2	E	101	105	parallel
Strand 3	E	84	91	anti-parallel
Strand 4	E	33	37	anti-parallel
Strand 5	E	44	47	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	12	first strand
Strand 2	E	101	105	parallel
Strand 3	E	84	91	anti-parallel
Strand 4	E	94	97	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	18	23	first strand
Strand 2	E	69	74	anti-parallel
Strand 3	E	61	66	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	12	first strand
Strand 2	G	101	105	parallel
Strand 3	G	84	91	anti-parallel
Strand 4	G	33	37	anti-parallel
Strand 5	G	44	47	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	12	first strand
Strand 2	G	101	105	parallel
Strand 3	G	84	91	anti-parallel
Strand 4	G	94	97	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	18	23	first strand
Strand 2	G	69	74	anti-parallel
Strand 3	G	61	66	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	8	11	first strand
Strand 2	D	22	30	anti-parallel
Strand 3	D	83	89	anti-parallel
Strand 4	D	73	78	anti-parallel

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There are 6 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	16	first strand
Strand 2	D	121	124	parallel
Strand 3	D	97	102	anti-parallel
Strand 4	D	39	45	anti-parallel
Strand 5	D	50	56	anti-parallel
Strand 6	D	63	65	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	8	11	first strand
Strand 2	F	23	30	anti-parallel
Strand 3	F	83	88	anti-parallel
Strand 4	F	73	78	anti-parallel

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There are 6 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	15	16	first strand
Strand 2	F	121	124	parallel
Strand 3	F	97	103	anti-parallel
Strand 4	F	39	45	anti-parallel
Strand 5	F	50	56	anti-parallel
Strand 6	F	63	65	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	15	16	first strand
Strand 2	F	121	124	parallel
Strand 3	F	97	103	anti-parallel
Strand 4	F	116	117	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RH2

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RH2