Analysis of interatomic Contacts of Structural Units in PDB entry:
8RHF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RHF entry

There are 2 chains in PDB entry 8RHF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 HIS 62PRO 393
A
 HIS 60PRO 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 8RHF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
66 73Right-handed 310
Helix 2
AA2
B
75 82Right-handed alpha
Helix 3
AA3
B
93 106Right-handed alpha
Helix 4
AA4
B
107 118Right-handed alpha
Helix 5
AA5
B
120 131Right-handed alpha
Helix 6
AA6
B
134 138Right-handed 310
Helix 7
AA7
B
139 146Right-handed alpha
Helix 8
AA8
B
164 171Right-handed alpha
Helix 9
AA9
B
184 203Right-handed alpha
Helix 10
AB1
B
206 217Right-handed alpha
Helix 11
AB2
B
217 231Right-handed alpha
Helix 12
AB3
B
236 240Right-handed 310
Helix 13
AB4
B
243 262Right-handed alpha
Helix 14
AB5
B
263 267Right-handed 310
Helix 15
AB6
B
289 298Right-handed alpha
Helix 16
AB7
B
300 308Right-handed alpha
Helix 17
AB8
B
329 337Right-handed alpha
Helix 18
AB9
B
358 366Right-handed alpha
Helix 19
AC1
B
369 376Right-handed alpha
Helix 20
AC2
A
66 73Right-handed 310
Helix 21
AC3
A
75 83Right-handed alpha
Helix 22
AC4
A
93 106Right-handed alpha
Helix 23
AC5
A
107 118Right-handed alpha
Helix 24
AC6
A
120 131Right-handed alpha
Helix 25
AC7
A
134 138Right-handed 310
Helix 26
AC8
A
139 146Right-handed alpha
Helix 27
AC9
A
164 171Right-handed alpha
Helix 28
AD1
A
184 203Right-handed alpha
Helix 29
AD2
A
206 217Right-handed alpha
Helix 30
AD3
A
217 232Right-handed alpha
Helix 31
AD4
A
236 240Right-handed 310
Helix 32
AD5
A
243 262Right-handed alpha
Helix 33
AD6
A
263 267Right-handed 310
Helix 34
AD7
A
289 298Right-handed alpha
Helix 35
AD8
A
300 308Right-handed alpha
Helix 36
AD9
A
329 337Right-handed alpha
Helix 37
AE1
A
358 366Right-handed alpha
Helix 38
AE2
A
369 376Right-handed alpha
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There are 4 sheets in PDB entry 8RHF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 283first strand
Strand 2
B
322 326anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
350 352first strand
Strand 2
B
389 391anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 283first strand
Strand 2
A
322 326anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 352first strand
Strand 2
A
389 392anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il