Analysis of interatomic Contacts of Structural Units in PDB entry:
8RI9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RI9 entry

There are 5 chains in PDB entry 8RI9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 38LYS 97
C
 LEU 38LYS 97
A
 LEU 38LYS 97
D
 LEU 38LYS 97
E
 LEU 38LYS 97
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8RI9

There are 6 sheets in PDB entry 8RI9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 52first strand
Strand 2
B
43 52parallel
Strand 3
C
43 52parallel
Strand 4
D
43 52parallel
Strand 5
E
43 52parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
B
55 56parallel
Strand 3
C
55 56parallel
Strand 4
D
55 56parallel
Strand 5
E
55 56parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 66first strand
Strand 2
B
60 66parallel
Strand 3
C
60 66parallel
Strand 4
D
60 66parallel
Strand 5
E
60 66parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
B
70 71parallel
Strand 3
C
70 71parallel
Strand 4
D
70 71parallel
Strand 5
E
70 71parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 82first strand
Strand 2
B
75 82parallel
Strand 3
C
75 82parallel
Strand 4
D
75 82parallel
Strand 5
E
75 82parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 96first strand
Strand 2
B
89 96parallel
Strand 3
C
89 96parallel
Strand 4
D
89 96parallel
Strand 5
E
89 96parallel
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