Analysis of interatomic Contacts of Structural Units in PDB entry:
8RL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RL6 entry

There is 1 chain in PDB entry 8RL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 12SER 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8RL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 25Right-handed alpha
Helix 2
AA2
A
31 44Right-handed alpha
Helix 3
AA3
A
57 69Right-handed alpha
Helix 4
AA4
A
79 93Right-handed alpha
Helix 5
AA5
A
105 118Right-handed alpha
Helix 6
AA6
A
129 134Right-handed alpha
Helix 7
AA7
A
137 148Right-handed alpha
Helix 8
AA8
A
158 163Right-handed 310
Helix 9
AA9
A
170 182Right-handed alpha
Helix 10
AB1
A
196 207Right-handed alpha
Helix 11
AB2
A
237 251Right-handed alpha
Helix 12
AB3
A
268 283Right-handed alpha
Helix 13
AB4
A
294 307Right-handed alpha
Helix 14
AB5
A
339 349Right-handed alpha
Helix 15
AB6
A
364 385Right-handed alpha
Helix 16
AB7
A
388 407Right-handed alpha
Helix 17
AB8
A
411 421Right-handed alpha
Helix 18
AB9
A
436 451Right-handed alpha
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There are 2 sheets in PDB entry 8RL6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
125 128parallel
Strand 3
A
72 76parallel
Strand 4
A
151 156parallel
Strand 5
A
188 192parallel
Strand 6
A
47 51parallel
Strand 7
A
213 214parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 231first strand
Strand 2
A
357 363parallel
Strand 3
A
330 333parallel
Strand 4
A
262 266parallel
Strand 5
A
312 316parallel
Strand 6
A
288 289parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il