Analysis of interatomic Contacts of Structural Units in PDB entry:
8RMM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RMM entry

There are 21 chains in PDB entry 8RMM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 5	PRO 278
L	GLN 1	SER 114
B	LEU 5	PRO 278
M	GLN 1	SER 114
C	LYS 19	LEU 306
D	GLU 37	PHE 329
O	GLN 1	SER 125
E	SER 35	PHE 329
P	GLN 1	SER 125
F	GLU 37	PHE 329
Q	GLN 1	SER 125
G	GLU 37	PHE 329
R	GLN 1	SER 125
H	LEU 38	PHE 329
S	GLN 1	SER 125
I	LEU 38	PHE 329
T	GLN 1	SER 125
J	PHE 44	ALA 303
K	LEU 5	ILE 255
U	GLN 1	SER 114
N	GLN 1	SER 125

There are163 helices in PDB entry 8RMM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	15	Right-handed alpha
Helix 2	AA2	A	15	38	Right-handed alpha
Helix 3	AA3	A	48	70	Right-handed alpha
Helix 4	AA4	A	71	82	Right-handed alpha
Helix 5	AA5	A	95	107	Right-handed alpha
Helix 6	AA6	A	107	126	Right-handed alpha
Helix 7	AA7	A	126	133	Right-handed alpha
Helix 8	AA8	A	142	146	Right-handed 310
Helix 9	AA9	A	151	160	Right-handed alpha
Helix 10	AB1	A	170	208	Right-handed alpha
Helix 11	AB2	A	216	253	Right-handed alpha
Helix 12	AB3	A	268	273	Right-handed alpha
Helix 13	AB4	A	274	277	Right-handed 310
Helix 14	AB5	L	87	91	Right-handed 310
Helix 15	AB6	B	6	15	Right-handed alpha
Helix 16	AB7	B	15	38	Right-handed alpha
Helix 17	AB8	B	48	70	Right-handed alpha
Helix 18	AB9	B	72	82	Right-handed alpha
Helix 19	AC1	B	95	126	Right-handed alpha
Helix 20	AC2	B	126	133	Right-handed alpha
Helix 21	AC3	B	151	160	Right-handed alpha
Helix 22	AC4	B	170	208	Right-handed alpha
Helix 23	AC5	B	214	252	Right-handed alpha
Helix 24	AC6	B	268	275	Right-handed alpha
Helix 25	AC7	M	62	65	Right-handed 310
Helix 26	AC8	M	87	91	Right-handed 310
Helix 27	AC9	C	20	43	Right-handed alpha
Helix 28	AD1	C	52	60	Right-handed alpha
Helix 29	AD2	C	61	76	Right-handed alpha
Helix 30	AD3	C	76	89	Right-handed alpha
Helix 31	AD4	C	97	111	Right-handed alpha
Helix 32	AD5	C	111	125	Right-handed alpha
Helix 33	AD6	C	125	133	Right-handed alpha
Helix 34	AD7	C	137	141	Right-handed 310
Helix 35	AD8	C	152	159	Right-handed alpha
Helix 36	AD9	C	166	168	Right-handed 310
Helix 37	AE1	C	169	209	Right-handed alpha
Helix 38	AE2	C	213	252	Right-handed alpha
Helix 39	AE3	C	257	267	Right-handed alpha
Helix 40	AE4	C	274	281	Right-handed alpha
Helix 41	AE5	C	297	306	Right-handed alpha
Helix 42	AE6	D	38	42	Right-handed alpha
Helix 43	AE7	D	52	76	Right-handed alpha
Helix 44	AE8	D	79	90	Right-handed alpha
Helix 45	AE9	D	95	111	Right-handed alpha
Helix 46	AF1	D	111	125	Right-handed alpha
Helix 47	AF2	D	125	130	Right-handed alpha
Helix 48	AF3	D	137	141	Right-handed 310
Helix 49	AF4	D	152	158	Right-handed alpha
Helix 50	AF5	D	159	163	Right-handed 310
Helix 51	AF6	D	166	168	Right-handed 310
Helix 52	AF7	D	169	210	Right-handed alpha
Helix 53	AF8	D	213	252	Right-handed alpha
Helix 54	AF9	D	257	267	Right-handed alpha
Helix 55	AG1	D	274	280	Right-handed alpha
Helix 56	AG2	D	297	304	Right-handed alpha
Helix 57	AG3	D	323	329	Right-handed alpha
Helix 58	AG4	O	87	91	Right-handed 310
Helix 59	AG5	E	36	42	Right-handed alpha
Helix 60	AG6	E	52	76	Right-handed alpha
Helix 61	AG7	E	79	89	Right-handed alpha
Helix 62	AG8	E	95	111	Right-handed alpha
Helix 63	AG9	E	111	125	Right-handed alpha
Helix 64	AH1	E	125	133	Right-handed alpha
Helix 65	AH2	E	134	136	Right-handed 310
Helix 66	AH3	E	137	141	Right-handed 310
Helix 67	AH4	E	152	159	Right-handed alpha
Helix 68	AH5	E	160	163	Right-handed 310
Helix 69	AH6	E	166	168	Right-handed 310
Helix 70	AH7	E	169	210	Right-handed alpha
Helix 71	AH8	E	213	252	Right-handed alpha
Helix 72	AH9	E	257	267	Right-handed alpha
Helix 73	AI1	E	274	280	Right-handed alpha
Helix 74	AI2	E	297	304	Right-handed alpha
Helix 75	AI3	E	323	329	Right-handed alpha
Helix 76	AI4	P	87	91	Right-handed 310
Helix 77	AI5	F	38	42	Right-handed alpha
Helix 78	AI6	F	52	76	Right-handed alpha
Helix 79	AI7	F	79	90	Right-handed alpha
Helix 80	AI8	F	95	111	Right-handed alpha
Helix 81	AI9	F	111	125	Right-handed alpha
Helix 82	AJ1	F	125	132	Right-handed alpha
Helix 83	AJ2	F	137	141	Right-handed 310
Helix 84	AJ3	F	152	159	Right-handed alpha
Helix 85	AJ4	F	160	163	Right-handed 310
Helix 86	AJ5	F	166	168	Right-handed 310
Helix 87	AJ6	F	169	210	Right-handed alpha
Helix 88	AJ7	F	213	252	Right-handed alpha
Helix 89	AJ8	F	259	267	Right-handed alpha
Helix 90	AJ9	F	274	280	Right-handed alpha
Helix 91	AK1	F	297	304	Right-handed alpha
Helix 92	AK2	F	323	329	Right-handed alpha
Helix 93	AK3	Q	87	91	Right-handed 310
Helix 94	AK4	G	38	42	Right-handed alpha
Helix 95	AK5	G	52	76	Right-handed alpha
Helix 96	AK6	G	79	89	Right-handed alpha
Helix 97	AK7	G	95	111	Right-handed alpha
Helix 98	AK8	G	111	125	Right-handed alpha
Helix 99	AK9	G	125	132	Right-handed alpha
Helix 100	AL1	G	133	136	Right-handed 310
Helix 101	AL2	G	152	159	Right-handed alpha
Helix 102	AL3	G	160	163	Right-handed 310
Helix 103	AL4	G	166	168	Right-handed 310
Helix 104	AL5	G	169	210	Right-handed alpha
Helix 105	AL6	G	215	252	Right-handed alpha
Helix 106	AL7	G	257	267	Right-handed alpha
Helix 107	AL8	G	274	280	Right-handed alpha
Helix 108	AL9	G	297	304	Right-handed alpha
Helix 109	AM1	G	323	329	Right-handed alpha
Helix 110	AM2	R	87	91	Right-handed 310
Helix 111	AM3	H	52	76	Right-handed alpha
Helix 112	AM4	H	79	89	Right-handed alpha
Helix 113	AM5	H	95	111	Right-handed alpha
Helix 114	AM6	H	111	125	Right-handed alpha
Helix 115	AM7	H	125	132	Right-handed alpha
Helix 116	AM8	H	133	136	Right-handed 310
Helix 117	AM9	H	152	159	Right-handed alpha
Helix 118	AN1	H	166	168	Right-handed 310
Helix 119	AN2	H	169	210	Right-handed alpha
Helix 120	AN3	H	213	252	Right-handed alpha
Helix 121	AN4	H	257	267	Right-handed alpha
Helix 122	AN5	H	274	280	Right-handed alpha
Helix 123	AN6	H	297	304	Right-handed alpha
Helix 124	AN7	H	323	328	Right-handed alpha
Helix 125	AN8	S	87	91	Right-handed 310
Helix 126	AN9	I	52	76	Right-handed alpha
Helix 127	AO1	I	77	90	Right-handed alpha
Helix 128	AO2	I	95	111	Right-handed alpha
Helix 129	AO3	I	111	125	Right-handed alpha
Helix 130	AO4	I	125	132	Right-handed alpha
Helix 131	AO5	I	137	141	Right-handed 310
Helix 132	AO6	I	152	159	Right-handed alpha
Helix 133	AO7	I	166	168	Right-handed 310
Helix 134	AO8	I	169	210	Right-handed alpha
Helix 135	AO9	I	213	252	Right-handed alpha
Helix 136	AP1	I	257	267	Right-handed alpha
Helix 137	AP2	I	274	280	Right-handed alpha
Helix 138	AP3	I	297	304	Right-handed alpha
Helix 139	AP4	I	323	328	Right-handed alpha
Helix 140	AP5	T	87	91	Right-handed 310
Helix 141	AP6	J	52	76	Right-handed alpha
Helix 142	AP7	J	77	89	Right-handed alpha
Helix 143	AP8	J	99	110	Right-handed alpha
Helix 144	AP9	J	111	125	Right-handed alpha
Helix 145	AQ1	J	125	135	Right-handed alpha
Helix 146	AQ2	J	153	159	Right-handed alpha
Helix 147	AQ3	J	170	210	Right-handed alpha
Helix 148	AQ4	J	213	252	Right-handed alpha
Helix 149	AQ5	J	257	267	Right-handed alpha
Helix 150	AQ6	J	274	282	Right-handed alpha
Helix 151	AQ7	J	297	303	Right-handed alpha
Helix 152	AQ8	K	6	14	Right-handed alpha
Helix 153	AQ9	K	15	36	Right-handed alpha
Helix 154	AR1	K	48	70	Right-handed alpha
Helix 155	AR2	K	72	82	Right-handed alpha
Helix 156	AR3	K	95	112	Right-handed alpha
Helix 157	AR4	K	112	126	Right-handed alpha
Helix 158	AR5	K	126	131	Right-handed alpha
Helix 159	AR6	K	151	158	Right-handed alpha
Helix 160	AR7	K	170	210	Right-handed alpha
Helix 161	AR8	K	216	252	Right-handed alpha
Helix 162	AR9	U	87	91	Right-handed 310
Helix 163	AS1	N	87	91	Right-handed 310

There are 33 sheets in PDB entry 8RMM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	18	24	anti-parallel
Strand 3	L	78	83	anti-parallel
Strand 4	L	68	73	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	58	60	first strand
Strand 2	L	46	51	anti-parallel
Strand 3	L	35	39	anti-parallel
Strand 4	L	92	97	anti-parallel
Strand 5	L	109	111	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	5	7	first strand
Strand 2	M	18	23	anti-parallel
Strand 3	M	78	83	anti-parallel
Strand 4	M	68	73	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	58	60	first strand
Strand 2	M	46	51	anti-parallel
Strand 3	M	35	39	anti-parallel
Strand 4	M	93	97	anti-parallel
Strand 5	M	109	110	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	289	290	first strand
Strand 2	D	293	294	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	3	7	first strand
Strand 2	O	21	25	anti-parallel
Strand 3	O	78	83	anti-parallel
Strand 4	O	68	73	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	58	60	first strand
Strand 2	O	45	52	anti-parallel
Strand 3	O	33	39	anti-parallel
Strand 4	O	93	99	anti-parallel
Strand 5	O	109	115	anti-parallel
Strand 6	O	103	105	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	58	60	first strand
Strand 2	O	45	52	anti-parallel
Strand 3	O	33	39	anti-parallel
Strand 4	O	93	99	anti-parallel
Strand 5	O	109	115	anti-parallel
Strand 6	E	315	319	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	289	290	first strand
Strand 2	E	293	294	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	3	7	first strand
Strand 2	P	17	25	anti-parallel
Strand 3	P	78	84	anti-parallel
Strand 4	P	68	73	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	58	60	first strand
Strand 2	P	46	52	anti-parallel
Strand 3	P	33	39	anti-parallel
Strand 4	P	93	99	anti-parallel
Strand 5	P	109	119	anti-parallel
Strand 6	P	103	105	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	58	60	first strand
Strand 2	P	46	52	anti-parallel
Strand 3	P	33	39	anti-parallel
Strand 4	P	93	99	anti-parallel
Strand 5	P	109	119	anti-parallel
Strand 6	F	315	319	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	289	290	first strand
Strand 2	F	293	294	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	3	7	first strand
Strand 2	Q	21	25	anti-parallel
Strand 3	Q	78	83	anti-parallel
Strand 4	Q	68	73	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	58	60	first strand
Strand 2	Q	45	52	anti-parallel
Strand 3	Q	33	39	anti-parallel
Strand 4	Q	92	99	anti-parallel
Strand 5	Q	109	116	anti-parallel
Strand 6	Q	119	121	first strand

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	103	105	first strand
Strand 2	Q	109	116	anti-parallel
Strand 3	Q	92	99	anti-parallel
Strand 4	G	315	319	first strand

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	289	290	first strand
Strand 2	G	293	294	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	3	7	first strand
Strand 2	R	17	25	anti-parallel
Strand 3	R	78	84	anti-parallel
Strand 4	R	68	73	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	58	60	first strand
Strand 2	R	45	52	anti-parallel
Strand 3	R	33	39	anti-parallel
Strand 4	R	93	99	anti-parallel
Strand 5	R	109	115	anti-parallel
Strand 6	R	103	105	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	58	60	first strand
Strand 2	R	45	52	anti-parallel
Strand 3	R	33	39	anti-parallel
Strand 4	R	93	99	anti-parallel
Strand 5	R	109	115	anti-parallel
Strand 6	H	315	319	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	289	290	first strand
Strand 2	H	293	294	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	3	7	first strand
Strand 2	S	18	25	anti-parallel
Strand 3	S	78	83	anti-parallel
Strand 4	S	68	73	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	58	60	first strand
Strand 2	S	45	52	anti-parallel
Strand 3	S	33	39	anti-parallel
Strand 4	S	93	99	anti-parallel
Strand 5	S	109	115	anti-parallel
Strand 6	S	103	105	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	58	60	first strand
Strand 2	S	45	52	anti-parallel
Strand 3	S	33	39	anti-parallel
Strand 4	S	93	99	anti-parallel
Strand 5	S	109	115	anti-parallel
Strand 6	I	315	319	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	289	290	first strand
Strand 2	I	293	294	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	3	7	first strand
Strand 2	T	18	25	anti-parallel
Strand 3	T	78	83	anti-parallel
Strand 4	T	68	73	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	58	60	first strand
Strand 2	T	45	52	anti-parallel
Strand 3	T	33	39	anti-parallel
Strand 4	T	93	97	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	4	7	first strand
Strand 2	U	18	24	anti-parallel
Strand 3	U	78	83	anti-parallel
Strand 4	U	68	73	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	10	13	first strand
Strand 2	U	109	114	parallel
Strand 3	U	92	97	anti-parallel
Strand 4	U	34	39	anti-parallel
Strand 5	U	46	51	anti-parallel
Strand 6	U	58	60	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	7	first strand
Strand 2	N	21	25	anti-parallel
Strand 3	N	78	83	anti-parallel
Strand 4	N	68	73	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	58	60	first strand
Strand 2	N	45	52	anti-parallel
Strand 3	N	33	39	anti-parallel
Strand 4	N	92	99	anti-parallel
Strand 5	N	114	116	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	58	60	first strand
Strand 2	N	45	52	anti-parallel
Strand 3	N	33	39	anti-parallel
Strand 4	N	92	99	anti-parallel
Strand 5	N	119	121	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	103	105	first strand
Strand 2	N	109	111	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RMM

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RMM