Analysis of interatomic Contacts of Structural Units in PDB entry:
8ROL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ROL entry

There are 2 chains in PDB entry 8ROL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 1212
B
 GLY 12PHE 89
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8ROL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 50Right-handed alpha
Helix 2
AA2
A
51 55Right-handed 310
Helix 3
AA3
A
57 63Right-handed alpha
Helix 4
AA4
A
117 127Right-handed alpha
Helix 5
AA5
A
141 150Right-handed alpha
Helix 6
AA6
A
151 163Right-handed alpha
Helix 7
AA7
A
166 210Right-handed alpha
Helix 8
AA8
A
984 989Right-handed alpha
Helix 9
AA9
A
989 1026Right-handed alpha
Helix 10
AB1
A
1027 1048Right-handed alpha
Helix 11
AB2
A
1113 1115Right-handed 310
Helix 12
AB3
A
1116 1134Right-handed alpha
Helix 13
AB4
A
1145 1149Right-handed 310
Helix 14
AB5
A
1151 1166Right-handed alpha
Helix 15
AB6
A
1176 1181Right-handed 310
Helix 16
AB7
A
1202 1212Right-handed alpha
Helix 17
AB8
B
13 22Right-handed alpha
Helix 18
AB9
B
23 27Right-handed 310
Helix 19
AC1
B
28 35Right-handed alpha
Helix 20
AC2
B
36 46Right-handed alpha
Helix 21
AC3
B
52 89Right-handed alpha
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There are 3 sheets in PDB entry 8ROL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
2 9anti-parallel
Strand 3
A
75 83anti-parallel
Strand 4
A
95 103anti-parallel
Strand 5
A
106 111anti-parallel
Strand 6
A
114 116anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 140first strand
Strand 2
A
1139 1143parallel
Strand 3
A
1169 1173parallel
Strand 4
A
27 32parallel
Strand 5
A
1185 1191parallel
Strand 6
A
1196 1200anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1052 1058first strand
Strand 2
A
1095 1101anti-parallel
Strand 3
A
1110 1111anti-parallel
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