Analysis of interatomic Contacts of Structural Units in PDB entry:
8ROQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ROQ entry

There are 16 chains in PDB entry 8ROQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 11VAL 937
B
 ALA 2ASN 935
C
 LEU 4VAL 937
D
 THR 10VAL 937
E
 ALA 11VAL 937
F
 ALA 2ALA 936
G
 LEU 8VAL 937
H
 ALA 11ASN 935
I
 ALA 11VAL 937
J
 ALA 11ALA 936
K
 ALA 2VAL 937
L
 ALA 11VAL 937
M
 LEU 54LEU 524
N
 THR 16ALA 259
O
 MET 1GLU 241
P
 MET 1GLU 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are317 helices in PDB entry 8ROQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 18Right-handed alpha
Helix 2
AA2
A
24 29Right-handed alpha
Helix 3
AA3
A
30 40Right-handed alpha
Helix 4
AA4
A
46 50Right-handed 310
Helix 5
AA5
A
165 174Right-handed alpha
Helix 6
AA6
A
190 194Right-handed 310
Helix 7
AA7
A
268 272Right-handed 310
Helix 8
AA8
A
290 294Right-handed 310
Helix 9
AA9
A
325 338Right-handed alpha
Helix 10
AB1
A
355 360Right-handed alpha
Helix 11
AB2
A
427 441Right-handed alpha
Helix 12
AB3
A
442 445Right-handed 310
Helix 13
AB4
A
446 448Right-handed 310
Helix 14
AB5
A
465 471Right-handed alpha
Helix 15
AB6
A
505 514Right-handed alpha
Helix 16
AB7
A
531 536Right-handed alpha
Helix 17
AB8
A
553 558Right-handed alpha
Helix 18
AB9
A
588 601Right-handed alpha
Helix 19
AC1
A
651 653Right-handed 310
Helix 20
AC2
A
729 742Right-handed alpha
Helix 21
AC3
A
751 758Right-handed 310
Helix 22
AC4
A
796 800Right-handed 310
Helix 23
AC5
A
805 809Right-handed 310
Helix 24
AC6
A
840 844Right-handed 310
Helix 25
AC7
B
24 29Right-handed alpha
Helix 26
AC8
B
30 40Right-handed alpha
Helix 27
AC9
B
46 50Right-handed 310
Helix 28
AD1
B
165 176Right-handed alpha
Helix 29
AD2
B
190 194Right-handed 310
Helix 30
AD3
B
268 272Right-handed 310
Helix 31
AD4
B
290 294Right-handed 310
Helix 32
AD5
B
325 338Right-handed alpha
Helix 33
AD6
B
355 360Right-handed alpha
Helix 34
AD7
B
427 441Right-handed alpha
Helix 35
AD8
B
446 448Right-handed 310
Helix 36
AD9
B
465 471Right-handed alpha
Helix 37
AE1
B
505 514Right-handed alpha
Helix 38
AE2
B
531 536Right-handed alpha
Helix 39
AE3
B
553 558Right-handed alpha
Helix 40
AE4
B
588 600Right-handed alpha
Helix 41
AE5
B
651 653Right-handed 310
Helix 42
AE6
B
729 742Right-handed alpha
Helix 43
AE7
B
751 755Right-handed 310
Helix 44
AE8
B
796 800Right-handed 310
Helix 45
AE9
B
805 809Right-handed 310
Helix 46
AF1
B
840 844Right-handed 310
Helix 47
AF2
B
877 882Right-handed alpha
Helix 48
AF3
C
13 18Right-handed alpha
Helix 49
AF4
C
24 29Right-handed alpha
Helix 50
AF5
C
30 40Right-handed alpha
Helix 51
AF6
C
46 50Right-handed 310
Helix 52
AF7
C
165 176Right-handed alpha
Helix 53
AF8
C
190 194Right-handed 310
Helix 54
AF9
C
268 272Right-handed 310
Helix 55
AG1
C
290 294Right-handed 310
Helix 56
AG2
C
301 305Right-handed 310
Helix 57
AG3
C
325 338Right-handed alpha
Helix 58
AG4
C
355 360Right-handed alpha
Helix 59
AG5
C
427 441Right-handed alpha
Helix 60
AG6
C
442 445Right-handed 310
Helix 61
AG7
C
446 448Right-handed 310
Helix 62
AG8
C
465 471Right-handed alpha
Helix 63
AG9
C
505 514Right-handed alpha
Helix 64
AH1
C
531 536Right-handed alpha
Helix 65
AH2
C
553 558Right-handed alpha
Helix 66
AH3
C
588 600Right-handed alpha
Helix 67
AH4
C
729 742Right-handed alpha
Helix 68
AH5
C
751 755Right-handed 310
Helix 69
AH6
C
796 800Right-handed 310
Helix 70
AH7
C
805 809Right-handed 310
Helix 71
AH8
C
840 844Right-handed 310
Helix 72
AH9
C
873 877Right-handed 310
Helix 73
AI1
D
12 18Right-handed alpha
Helix 74
AI2
D
24 29Right-handed alpha
Helix 75
AI3
D
30 40Right-handed alpha
Helix 76
AI4
D
46 50Right-handed 310
Helix 77
AI5
D
165 176Right-handed alpha
Helix 78
AI6
D
190 194Right-handed 310
Helix 79
AI7
D
268 272Right-handed 310
Helix 80
AI8
D
290 294Right-handed 310
Helix 81
AI9
D
325 338Right-handed alpha
Helix 82
AJ1
D
344 348Right-handed 310
Helix 83
AJ2
D
355 360Right-handed alpha
Helix 84
AJ3
D
427 441Right-handed alpha
Helix 85
AJ4
D
446 448Right-handed 310
Helix 86
AJ5
D
465 471Right-handed alpha
Helix 87
AJ6
D
491 495Right-handed 310
Helix 88
AJ7
D
505 514Right-handed alpha
Helix 89
AJ8
D
531 536Right-handed alpha
Helix 90
AJ9
D
553 558Right-handed alpha
Helix 91
AK1
D
588 600Right-handed alpha
Helix 92
AK2
D
729 742Right-handed alpha
Helix 93
AK3
D
751 755Right-handed 310
Helix 94
AK4
D
796 800Right-handed 310
Helix 95
AK5
D
805 809Right-handed 310
Helix 96
AK6
D
840 844Right-handed 310
Helix 97
AK7
D
873 877Right-handed 310
Helix 98
AK8
E
12 18Right-handed alpha
Helix 99
AK9
E
24 28Right-handed 310
Helix 100
AL1
E
30 40Right-handed alpha
Helix 101
AL2
E
46 50Right-handed 310
Helix 102
AL3
E
167 176Right-handed alpha
Helix 103
AL4
E
190 194Right-handed 310
Helix 104
AL5
E
268 272Right-handed 310
Helix 105
AL6
E
290 294Right-handed 310
Helix 106
AL7
E
325 338Right-handed alpha
Helix 107
AL8
E
355 360Right-handed alpha
Helix 108
AL9
E
427 441Right-handed alpha
Helix 109
AM1
E
446 448Right-handed 310
Helix 110
AM2
E
465 471Right-handed alpha
Helix 111
AM3
E
505 514Right-handed alpha
Helix 112
AM4
E
531 536Right-handed alpha
Helix 113
AM5
E
553 558Right-handed alpha
Helix 114
AM6
E
588 600Right-handed alpha
Helix 115
AM7
E
651 653Right-handed 310
Helix 116
AM8
E
729 742Right-handed alpha
Helix 117
AM9
E
751 755Right-handed 310
Helix 118
AN1
E
796 800Right-handed 310
Helix 119
AN2
E
805 809Right-handed 310
Helix 120
AN3
E
840 844Right-handed 310
Helix 121
AN4
F
13 18Right-handed alpha
Helix 122
AN5
F
24 28Right-handed 310
Helix 123
AN6
F
30 40Right-handed alpha
Helix 124
AN7
F
46 50Right-handed 310
Helix 125
AN8
F
165 173Right-handed alpha
Helix 126
AN9
F
190 194Right-handed 310
Helix 127
AO1
F
268 272Right-handed 310
Helix 128
AO2
F
290 294Right-handed 310
Helix 129
AO3
F
301 305Right-handed 310
Helix 130
AO4
F
325 338Right-handed alpha
Helix 131
AO5
F
355 360Right-handed alpha
Helix 132
AO6
F
427 441Right-handed alpha
Helix 133
AO7
F
442 445Right-handed 310
Helix 134
AO8
F
446 448Right-handed 310
Helix 135
AO9
F
465 471Right-handed alpha
Helix 136
AP1
F
505 514Right-handed alpha
Helix 137
AP2
F
531 536Right-handed alpha
Helix 138
AP3
F
553 558Right-handed alpha
Helix 139
AP4
F
588 600Right-handed alpha
Helix 140
AP5
F
651 653Right-handed 310
Helix 141
AP6
F
729 742Right-handed alpha
Helix 142
AP7
F
751 755Right-handed 310
Helix 143
AP8
F
796 800Right-handed 310
Helix 144
AP9
F
840 844Right-handed 310
Helix 145
AQ1
F
873 877Right-handed 310
Helix 146
AQ2
G
24 28Right-handed 310
Helix 147
AQ3
G
30 40Right-handed alpha
Helix 148
AQ4
G
46 50Right-handed 310
Helix 149
AQ5
G
165 176Right-handed alpha
Helix 150
AQ6
G
195 199Right-handed 310
Helix 151
AQ7
G
268 272Right-handed 310
Helix 152
AQ8
G
290 294Right-handed 310
Helix 153
AQ9
G
325 338Right-handed alpha
Helix 154
AR1
G
355 360Right-handed alpha
Helix 155
AR2
G
427 441Right-handed alpha
Helix 156
AR3
G
446 448Right-handed 310
Helix 157
AR4
G
465 471Right-handed alpha
Helix 158
AR5
G
491 495Right-handed 310
Helix 159
AR6
G
505 514Right-handed alpha
Helix 160
AR7
G
531 536Right-handed alpha
Helix 161
AR8
G
553 558Right-handed alpha
Helix 162
AR9
G
588 598Right-handed alpha
Helix 163
AS1
G
601 605Right-handed 310
Helix 164
AS2
G
729 742Right-handed alpha
Helix 165
AS3
G
751 755Right-handed 310
Helix 166
AS4
G
796 800Right-handed 310
Helix 167
AS5
G
805 809Right-handed 310
Helix 168
AS6
G
840 844Right-handed 310
Helix 169
AS7
H
12 18Right-handed alpha
Helix 170
AS8
H
24 29Right-handed alpha
Helix 171
AS9
H
30 40Right-handed alpha
Helix 172
AT1
H
46 50Right-handed 310
Helix 173
AT2
H
165 176Right-handed alpha
Helix 174
AT3
H
268 272Right-handed 310
Helix 175
AT4
H
290 294Right-handed 310
Helix 176
AT5
H
301 305Right-handed 310
Helix 177
AT6
H
325 338Right-handed alpha
Helix 178
AT7
H
355 360Right-handed alpha
Helix 179
AT8
H
427 441Right-handed alpha
Helix 180
AT9
H
446 448Right-handed 310
Helix 181
AU1
H
465 471Right-handed alpha
Helix 182
AU2
H
505 516Right-handed alpha
Helix 183
AU3
H
531 536Right-handed alpha
Helix 184
AU4
H
553 558Right-handed alpha
Helix 185
AU5
H
588 600Right-handed alpha
Helix 186
AU6
H
651 653Right-handed 310
Helix 187
AU7
H
729 742Right-handed alpha
Helix 188
AU8
H
751 755Right-handed 310
Helix 189
AU9
H
796 800Right-handed 310
Helix 190
AV1
H
805 809Right-handed 310
Helix 191
AV2
H
840 844Right-handed 310
Helix 192
AV3
I
12 18Right-handed alpha
Helix 193
AV4
I
24 29Right-handed alpha
Helix 194
AV5
I
30 40Right-handed alpha
Helix 195
AV6
I
46 50Right-handed 310
Helix 196
AV7
I
165 176Right-handed alpha
Helix 197
AV8
I
190 194Right-handed 310
Helix 198
AV9
I
268 272Right-handed 310
Helix 199
AW1
I
290 294Right-handed 310
Helix 200
AW2
I
325 338Right-handed alpha
Helix 201
AW3
I
355 359Right-handed alpha
Helix 202
AW4
I
427 441Right-handed alpha
Helix 203
AW5
I
446 448Right-handed 310
Helix 204
AW6
I
465 471Right-handed alpha
Helix 205
AW7
I
505 514Right-handed alpha
Helix 206
AW8
I
531 536Right-handed alpha
Helix 207
AW9
I
553 558Right-handed alpha
Helix 208
AX1
I
588 600Right-handed alpha
Helix 209
AX2
I
729 742Right-handed alpha
Helix 210
AX3
I
751 755Right-handed 310
Helix 211
AX4
I
796 800Right-handed 310
Helix 212
AX5
I
805 809Right-handed 310
Helix 213
AX6
I
840 844Right-handed 310
Helix 214
AX7
J
12 18Right-handed alpha
Helix 215
AX8
J
24 28Right-handed 310
Helix 216
AX9
J
30 40Right-handed alpha
Helix 217
AY1
J
46 50Right-handed 310
Helix 218
AY2
J
165 175Right-handed alpha
Helix 219
AY3
J
195 199Right-handed 310
Helix 220
AY4
J
268 272Right-handed 310
Helix 221
AY5
J
290 294Right-handed 310
Helix 222
AY6
J
325 338Right-handed alpha
Helix 223
AY7
J
355 360Right-handed alpha
Helix 224
AY8
J
427 441Right-handed alpha
Helix 225
AY9
J
446 448Right-handed 310
Helix 226
AZ1
J
465 471Right-handed alpha
Helix 227
AZ2
J
491 495Right-handed 310
Helix 228
AZ3
J
505 514Right-handed alpha
Helix 229
AZ4
J
531 536Right-handed alpha
Helix 230
AZ5
J
553 558Right-handed alpha
Helix 231
AZ6
J
588 601Right-handed alpha
Helix 232
AZ7
J
729 742Right-handed alpha
Helix 233
AZ8
J
751 755Right-handed 310
Helix 234
AZ9
J
796 800Right-handed 310
Helix 235
BA1
J
805 809Right-handed 310
Helix 236
BA2
J
840 844Right-handed 310
Helix 237
BA3
J
873 877Right-handed 310
Helix 238
BA4
K
13 18Right-handed alpha
Helix 239
BA5
K
24 29Right-handed alpha
Helix 240
BA6
K
30 40Right-handed alpha
Helix 241
BA7
K
46 50Right-handed 310
Helix 242
BA8
K
165 174Right-handed alpha
Helix 243
BA9
K
190 194Right-handed 310
Helix 244
BB1
K
195 199Right-handed 310
Helix 245
BB2
K
268 272Right-handed 310
Helix 246
BB3
K
290 294Right-handed 310
Helix 247
BB4
K
325 338Right-handed alpha
Helix 248
BB5
K
355 360Right-handed alpha
Helix 249
BB6
K
427 441Right-handed alpha
Helix 250
BB7
K
442 445Right-handed 310
Helix 251
BB8
K
446 448Right-handed 310
Helix 252
BB9
K
465 471Right-handed alpha
Helix 253
BC1
K
505 514Right-handed alpha
Helix 254
BC2
K
531 536Right-handed alpha
Helix 255
BC3
K
553 558Right-handed alpha
Helix 256
BC4
K
588 601Right-handed alpha
Helix 257
BC5
K
649 653Right-handed 310
Helix 258
BC6
K
729 742Right-handed alpha
Helix 259
BC7
K
751 755Right-handed 310
Helix 260
BC8
K
796 800Right-handed 310
Helix 261
BC9
K
805 809Right-handed 310
Helix 262
BD1
K
840 844Right-handed 310
Helix 263
BD2
L
12 18Right-handed alpha
Helix 264
BD3
L
24 29Right-handed alpha
Helix 265
BD4
L
30 40Right-handed alpha
Helix 266
BD5
L
46 50Right-handed 310
Helix 267
BD6
L
167 176Right-handed alpha
Helix 268
BD7
L
190 194Right-handed 310
Helix 269
BD8
L
195 199Right-handed 310
Helix 270
BD9
L
268 272Right-handed 310
Helix 271
BE1
L
290 294Right-handed 310
Helix 272
BE2
L
301 305Right-handed 310
Helix 273
BE3
L
325 338Right-handed alpha
Helix 274
BE4
L
355 360Right-handed alpha
Helix 275
BE5
L
427 441Right-handed alpha
Helix 276
BE6
L
446 448Right-handed 310
Helix 277
BE7
L
465 471Right-handed alpha
Helix 278
BE8
L
505 514Right-handed alpha
Helix 279
BE9
L
531 536Right-handed alpha
Helix 280
BF1
L
553 558Right-handed alpha
Helix 281
BF2
L
588 600Right-handed alpha
Helix 282
BF3
L
651 653Right-handed 310
Helix 283
BF4
L
729 742Right-handed alpha
Helix 284
BF5
L
751 755Right-handed 310
Helix 285
BF6
L
796 800Right-handed 310
Helix 286
BF7
L
840 844Right-handed 310
Helix 287
BF8
M
114 119Right-handed alpha
Helix 288
BF9
M
199 219Right-handed alpha
Helix 289
BG1
M
220 223Right-handed 310
Helix 290
BG2
M
277 283Right-handed alpha
Helix 291
BG3
M
299 302Right-handed 310
Helix 292
BG4
M
316 320Right-handed 310
Helix 293
BG5
M
359 366Right-handed alpha
Helix 294
BG6
M
431 442Right-handed alpha
Helix 295
BG7
N
17 23Right-handed alpha
Helix 296
BG8
N
38 51Right-handed alpha
Helix 297
BG9
N
60 72Right-handed alpha
Helix 298
BH1
N
76 78Right-handed 310
Helix 299
BH2
N
79 93Right-handed alpha
Helix 300
BH3
N
99 122Right-handed alpha
Helix 301
BH4
N
125 140Right-handed alpha
Helix 302
BH5
N
148 166Right-handed alpha
Helix 303
BH6
N
193 200Right-handed alpha
Helix 304
BH7
N
211 218Right-handed alpha
Helix 305
BH8
N
221 232Right-handed alpha
Helix 306
BH9
N
244 259Right-handed alpha
Helix 307
BI1
O
39 53Right-handed alpha
Helix 308
BI2
O
56 70Right-handed alpha
Helix 309
BI3
O
78 91Right-handed alpha
Helix 310
BI4
O
178 188Right-handed alpha
Helix 311
BI5
O
201 208Right-handed alpha
Helix 312
BI6
P
2 6Right-handed 310
Helix 313
BI7
P
39 53Right-handed alpha
Helix 314
BI8
P
56 69Right-handed alpha
Helix 315
BI9
P
78 92Right-handed alpha
Helix 316
BJ1
P
178 188Right-handed alpha
Helix 317
BJ2
P
201 208Right-handed alpha
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