Analysis of interatomic Contacts of Structural Units in PDB entry:
8ROV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ROV entry

There are 2 chains in PDB entry 8ROV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 62LEU 209
B
 SER 62LEU 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 8ROV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 109Right-handed alpha
Helix 2
AA2
A
119 127Right-handed alpha
Helix 3
AA3
A
128 130Right-handed 310
Helix 4
AA4
B
99 110Right-handed alpha
Helix 5
AA5
B
119 128Right-handed alpha
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There are 5 sheets in PDB entry 8ROV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 209first strand
Strand 2
A
76 80anti-parallel
Strand 3
A
63 68anti-parallel
Strand 4
B
63 68anti-parallel
Strand 5
B
76 80anti-parallel
Strand 6
B
207 208anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
89 98anti-parallel
Strand 3
A
198 205anti-parallel
Strand 4
A
136 141parallel
Strand 5
A
150 151anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
198 205anti-parallel
Strand 3
A
136 141parallel
Strand 4
A
176 182anti-parallel
Strand 5
A
186 192anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 86first strand
Strand 2
B
89 98anti-parallel
Strand 3
B
198 205anti-parallel
Strand 4
B
136 141parallel
Strand 5
B
150 151anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 114first strand
Strand 2
B
198 205anti-parallel
Strand 3
B
136 141parallel
Strand 4
B
176 182anti-parallel
Strand 5
B
186 192anti-parallel
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