Analysis of interatomic Contacts of Structural Units in PDB entry:
8RRO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RRO entry

There are 40 chains in PDB entry 8RRO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3SER 204
B
 VAL 4ASP 245
C
 GLY 1TRP 274
D
 ILE 1ASP 98
E
 VAL 1LYS 10
F
 GLY 2PRO 203
G
 THR 5ALA 244
H
 GLY 1GLU 275
I
 ILE 1ARG 97
J
 VAL 1LYS 10
K
 GLY 2SER 204
L
 THR 5ALA 244
M
 GLY 1LEU 276
N
 ILE 1ASP 98
O
 VAL 1LYS 10
P
 ASP 3PRO 203
Q
 THR 5ALA 244
R
 GLY 1SER 277
S
 ILE 1ASP 98
T
 VAL 1LYS 10
U
 ASP 3PRO 203
V
 THR 5ALA 244
W
 GLY 1LEU 276
X
 ILE 1ASP 98
Y
 VAL 1LYS 10
Z
 ASP 3PRO 203
a
 THR 5ALA 244
b
 GLY 1LEU 276
c
 ILE 1ASP 98
d
 VAL 1LYS 10
e
 ASP 3SER 204
f
 THR 5ALA 244
g
 GLY 1TRP 274
h
 ILE 1ARG 97
i
 VAL 1LYS 10
j
 ASP 3PHE 202
k
 THR 5ALA 244
l
 GLY 1ARG 273
m
 ILE 1ARG 97
n
 VAL 1LYS 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 8RRO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
83 87Right-handed 310
Helix 2
AA2
A
186 191Right-handed alpha
Helix 3
AA3
B
117 121Right-handed 310
Helix 4
AA4
B
132 140Right-handed alpha
Helix 5
AA5
B
199 203Right-handed alpha
Helix 6
AA6
C
49 53Right-handed 310
Helix 7
AA7
C
56 85Right-handed alpha
Helix 8
AA8
C
137 148Right-handed alpha
Helix 9
AA9
C
151 161Right-handed alpha
Helix 10
AB1
C
162 175Right-handed alpha
Helix 11
AB2
C
175 180Right-handed alpha
Helix 12
AB3
F
83 87Right-handed 310
Helix 13
AB4
F
186 191Right-handed alpha
Helix 14
AB5
G
117 121Right-handed 310
Helix 15
AB6
G
132 140Right-handed alpha
Helix 16
AB7
G
199 203Right-handed alpha
Helix 17
AB8
H
49 53Right-handed 310
Helix 18
AB9
H
56 86Right-handed alpha
Helix 19
AC1
H
139 150Right-handed alpha
Helix 20
AC2
H
151 161Right-handed alpha
Helix 21
AC3
H
162 175Right-handed alpha
Helix 22
AC4
K
83 87Right-handed 310
Helix 23
AC5
K
186 191Right-handed 310
Helix 24
AC6
L
117 121Right-handed 310
Helix 25
AC7
L
132 140Right-handed alpha
Helix 26
AC8
L
199 203Right-handed alpha
Helix 27
AC9
M
49 53Right-handed 310
Helix 28
AD1
M
56 85Right-handed alpha
Helix 29
AD2
M
137 151Right-handed alpha
Helix 30
AD3
M
151 161Right-handed alpha
Helix 31
AD4
M
162 175Right-handed alpha
Helix 32
AD5
M
175 180Right-handed alpha
Helix 33
AD6
P
83 87Right-handed 310
Helix 34
AD7
P
186 190Right-handed 310
Helix 35
AD8
Q
117 121Right-handed 310
Helix 36
AD9
Q
132 140Right-handed alpha
Helix 37
AE1
Q
199 203Right-handed alpha
Helix 38
AE2
R
49 53Right-handed 310
Helix 39
AE3
R
56 85Right-handed alpha
Helix 40
AE4
R
137 151Right-handed alpha
Helix 41
AE5
R
153 162Right-handed alpha
Helix 42
AE6
R
162 175Right-handed alpha
Helix 43
AE7
U
83 87Right-handed 310
Helix 44
AE8
V
117 121Right-handed 310
Helix 45
AE9
V
132 140Right-handed alpha
Helix 46
AF1
V
199 203Right-handed alpha
Helix 47
AF2
W
49 53Right-handed 310
Helix 48
AF3
W
56 86Right-handed alpha
Helix 49
AF4
W
139 150Right-handed alpha
Helix 50
AF5
W
151 161Right-handed alpha
Helix 51
AF6
W
162 175Right-handed alpha
Helix 52
AF7
Z
83 87Right-handed 310
Helix 53
AF8
Z
186 193Right-handed 310
Helix 54
AF9
a
117 121Right-handed 310
Helix 55
AG1
a
132 140Right-handed alpha
Helix 56
AG2
a
199 203Right-handed alpha
Helix 57
AG3
b
49 53Right-handed 310
Helix 58
AG4
b
56 86Right-handed alpha
Helix 59
AG5
b
137 151Right-handed alpha
Helix 60
AG6
b
151 162Right-handed alpha
Helix 61
AG7
b
162 175Right-handed alpha
Helix 62
AG8
b
175 180Right-handed alpha
Helix 63
AG9
b
252 255Right-handed 310
Helix 64
AH1
e
83 87Right-handed 310
Helix 65
AH2
e
186 191Right-handed 310
Helix 66
AH3
f
117 121Right-handed 310
Helix 67
AH4
f
132 140Right-handed alpha
Helix 68
AH5
f
199 203Right-handed alpha
Helix 69
AH6
g
49 53Right-handed 310
Helix 70
AH7
g
56 85Right-handed alpha
Helix 71
AH8
g
139 151Right-handed alpha
Helix 72
AH9
g
151 162Right-handed alpha
Helix 73
AI1
g
162 175Right-handed alpha
Helix 74
AI2
g
175 180Right-handed alpha
Helix 75
AI3
j
83 87Right-handed 310
Helix 76
AI4
j
187 191Right-handed 310
Helix 77
AI5
k
117 121Right-handed 310
Helix 78
AI6
k
132 140Right-handed alpha
Helix 79
AI7
k
199 203Right-handed alpha
Helix 80
AI8
l
49 53Right-handed 310
Helix 81
AI9
l
56 86Right-handed alpha
Helix 82
AJ1
l
139 150Right-handed alpha
Helix 83
AJ2
l
153 162Right-handed alpha
Helix 84
AJ3
l
162 175Right-handed alpha
Helix 85
AJ4
l
175 180Right-handed alpha
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