Analysis of interatomic Contacts of Structural Units in PDB entry:
8RS8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RS8 entry

There are 3 chains in PDB entry 8RS8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1650	PRO 1859
B	MET 1650	PRO 1859
C	MET 1650	ASP 1840

There are 44 helices in PDB entry 8RS8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1658	1672	Right-handed alpha
Helix 2	AA2	A	1700	1709	Right-handed alpha
Helix 3	AA3	A	1716	1726	Right-handed alpha
Helix 4	AA4	A	1730	1734	Right-handed 310
Helix 5	AA5	A	1747	1755	Right-handed alpha
Helix 6	AA6	A	1776	1787	Right-handed alpha
Helix 7	AA7	A	1794	1798	Right-handed 310
Helix 8	AA8	A	1811	1816	Right-handed 310
Helix 9	AA9	A	1818	1827	Right-handed 310
Helix 10	AB1	A	1835	1845	Right-handed alpha
Helix 11	AB2	A	1850	1854	Right-handed 310
Helix 12	AB3	B	1658	1673	Right-handed alpha
Helix 13	AB4	B	1700	1709	Right-handed alpha
Helix 14	AB5	B	1716	1726	Right-handed alpha
Helix 15	AB6	B	1730	1735	Right-handed 310
Helix 16	AB7	B	1747	1755	Right-handed alpha
Helix 17	AB8	B	1776	1787	Right-handed alpha
Helix 18	AB9	B	1794	1798	Right-handed 310
Helix 19	AC1	B	1811	1816	Right-handed 310
Helix 20	AC2	B	1819	1827	Right-handed 310
Helix 21	AC3	B	1835	1845	Right-handed alpha
Helix 22	AC4	B	1850	1854	Right-handed 310
Helix 23	AC5	C	1658	1673	Right-handed alpha
Helix 24	AC6	C	1700	1709	Right-handed alpha
Helix 25	AC7	C	1716	1726	Right-handed alpha
Helix 26	AC8	C	1730	1735	Right-handed 310
Helix 27	AC9	C	1747	1755	Right-handed alpha
Helix 28	AD1	C	1776	1787	Right-handed alpha
Helix 29	AD2	C	1794	1798	Right-handed 310
Helix 30	AD3	C	1811	1815	Right-handed 310
Helix 31	AD4	C	1819	1827	Right-handed 310
Helix 32	AD5	C	1835	1845	Right-handed alpha
Helix 33	AD6	C	1850	1854	Right-handed 310
Helix 34	AD7	D	1658	1672	Right-handed alpha
Helix 35	AD8	D	1700	1709	Right-handed alpha
Helix 36	AD9	D	1716	1726	Right-handed alpha
Helix 37	AE1	D	1730	1735	Right-handed 310
Helix 38	AE2	D	1747	1755	Right-handed alpha
Helix 39	AE3	D	1776	1787	Right-handed alpha
Helix 40	AE4	D	1794	1798	Right-handed 310
Helix 41	AE5	D	1811	1815	Right-handed 310
Helix 42	AE6	D	1819	1827	Right-handed 310
Helix 43	AE7	D	1835	1845	Right-handed alpha
Helix 44	AE8	D	1850	1854	Right-handed 310

There are 12 sheets in PDB entry 8RS8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1675	1676	first strand
Strand 2	A	1651	1655	parallel
Strand 3	A	1686	1689	parallel
Strand 4	A	1712	1715	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1696	1697	first strand
Strand 2	A	1738	1739	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1790	1792	first strand
Strand 2	A	1764	1768	parallel
Strand 3	A	1805	1810	parallel
Strand 4	A	1832	1834	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1675	1676	first strand
Strand 2	B	1651	1655	parallel
Strand 3	B	1686	1689	parallel
Strand 4	B	1712	1715	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1696	1697	first strand
Strand 2	B	1738	1739	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1790	1791	first strand
Strand 2	B	1765	1768	parallel
Strand 3	B	1806	1810	parallel
Strand 4	B	1832	1834	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1675	1676	first strand
Strand 2	C	1651	1655	parallel
Strand 3	C	1686	1689	parallel
Strand 4	C	1712	1715	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1696	1697	first strand
Strand 2	C	1738	1739	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1790	1792	first strand
Strand 2	C	1764	1768	parallel
Strand 3	C	1805	1810	parallel
Strand 4	C	1832	1834	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1675	1676	first strand
Strand 2	D	1651	1655	parallel
Strand 3	D	1686	1689	parallel
Strand 4	D	1712	1715	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1696	1697	first strand
Strand 2	D	1738	1739	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1790	1791	first strand
Strand 2	D	1764	1768	parallel
Strand 3	D	1805	1810	parallel
Strand 4	D	1832	1834	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RS8

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RS8