Analysis of interatomic Contacts of Structural Units in PDB entry:
8RS9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RS9 entry

There are 6 chains in PDB entry 8RS9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 21	GLN 763
B	ASN 21	GLN 763
C	ASN 21	GLN 763
D	ASN 21	GLN 763
E	ASN 21	GLN 763
F	ASN 21	GLN 763

There are202 helices in PDB entry 8RS9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	49	Right-handed alpha
Helix 2	AA2	A	86	91	Right-handed alpha
Helix 3	AA3	A	135	139	Right-handed 310
Helix 4	AA4	A	190	201	Right-handed alpha
Helix 5	AA5	A	210	226	Right-handed alpha
Helix 6	AA6	A	226	234	Right-handed alpha
Helix 7	AA7	A	251	263	Right-handed alpha
Helix 8	AA8	A	271	277	Right-handed alpha
Helix 9	AA9	A	278	295	Right-handed alpha
Helix 10	AB1	A	305	309	Right-handed 310
Helix 11	AB2	A	319	333	Right-handed alpha
Helix 12	AB3	A	373	385	Right-handed alpha
Helix 13	AB4	A	395	402	Right-handed alpha
Helix 14	AB5	A	409	427	Right-handed alpha
Helix 15	AB6	A	436	445	Right-handed alpha
Helix 16	AB7	A	448	458	Right-handed alpha
Helix 17	AB8	A	475	479	Right-handed 310
Helix 18	AB9	A	482	493	Right-handed alpha
Helix 19	AC1	A	494	498	Right-handed 310
Helix 20	AC2	A	499	507	Right-handed alpha
Helix 21	AC3	A	523	536	Right-handed alpha
Helix 22	AC4	A	543	553	Right-handed alpha
Helix 23	AC5	A	557	569	Right-handed alpha
Helix 24	AC6	A	580	586	Right-handed alpha
Helix 25	AC7	A	598	610	Right-handed alpha
Helix 26	AC8	A	612	616	Right-handed 310
Helix 27	AC9	A	625	629	Right-handed 310
Helix 28	AD1	A	630	634	Right-handed 310
Helix 29	AD2	A	651	662	Right-handed alpha
Helix 30	AD3	A	671	679	Right-handed alpha
Helix 31	AD4	A	684	716	Right-handed alpha
Helix 32	AD5	A	732	741	Right-handed alpha
Helix 33	AD6	A	748	760	Right-handed alpha
Helix 34	AD7	B	42	49	Right-handed alpha
Helix 35	AD8	B	86	91	Right-handed alpha
Helix 36	AD9	B	135	139	Right-handed 310
Helix 37	AE1	B	190	200	Right-handed alpha
Helix 38	AE2	B	201	206	Right-handed alpha
Helix 39	AE3	B	210	226	Right-handed alpha
Helix 40	AE4	B	226	234	Right-handed alpha
Helix 41	AE5	B	251	263	Right-handed alpha
Helix 42	AE6	B	271	277	Right-handed alpha
Helix 43	AE7	B	278	295	Right-handed alpha
Helix 44	AE8	B	305	309	Right-handed 310
Helix 45	AE9	B	319	333	Right-handed alpha
Helix 46	AF1	B	373	385	Right-handed alpha
Helix 47	AF2	B	395	402	Right-handed alpha
Helix 48	AF3	B	409	427	Right-handed alpha
Helix 49	AF4	B	436	445	Right-handed alpha
Helix 50	AF5	B	448	458	Right-handed alpha
Helix 51	AF6	B	475	479	Right-handed 310
Helix 52	AF7	B	482	493	Right-handed alpha
Helix 53	AF8	B	494	498	Right-handed 310
Helix 54	AF9	B	499	507	Right-handed alpha
Helix 55	AG1	B	523	536	Right-handed alpha
Helix 56	AG2	B	543	553	Right-handed alpha
Helix 57	AG3	B	557	569	Right-handed alpha
Helix 58	AG4	B	580	586	Right-handed alpha
Helix 59	AG5	B	598	610	Right-handed alpha
Helix 60	AG6	B	612	616	Right-handed 310
Helix 61	AG7	B	625	629	Right-handed 310
Helix 62	AG8	B	630	634	Right-handed 310
Helix 63	AG9	B	651	662	Right-handed alpha
Helix 64	AH1	B	671	679	Right-handed alpha
Helix 65	AH2	B	684	716	Right-handed alpha
Helix 66	AH3	B	732	741	Right-handed alpha
Helix 67	AH4	B	748	760	Right-handed alpha
Helix 68	AH5	C	42	49	Right-handed alpha
Helix 69	AH6	C	86	91	Right-handed alpha
Helix 70	AH7	C	135	139	Right-handed 310
Helix 71	AH8	C	190	201	Right-handed alpha
Helix 72	AH9	C	210	226	Right-handed alpha
Helix 73	AI1	C	226	234	Right-handed alpha
Helix 74	AI2	C	251	263	Right-handed alpha
Helix 75	AI3	C	271	277	Right-handed alpha
Helix 76	AI4	C	278	296	Right-handed alpha
Helix 77	AI5	C	305	309	Right-handed 310
Helix 78	AI6	C	319	333	Right-handed alpha
Helix 79	AI7	C	354	358	Right-handed 310
Helix 80	AI8	C	373	385	Right-handed alpha
Helix 81	AI9	C	395	402	Right-handed alpha
Helix 82	AJ1	C	409	427	Right-handed alpha
Helix 83	AJ2	C	436	445	Right-handed alpha
Helix 84	AJ3	C	448	458	Right-handed alpha
Helix 85	AJ4	C	475	479	Right-handed 310
Helix 86	AJ5	C	482	493	Right-handed alpha
Helix 87	AJ6	C	494	498	Right-handed 310
Helix 88	AJ7	C	499	507	Right-handed alpha
Helix 89	AJ8	C	523	536	Right-handed alpha
Helix 90	AJ9	C	543	553	Right-handed alpha
Helix 91	AK1	C	557	569	Right-handed alpha
Helix 92	AK2	C	580	586	Right-handed alpha
Helix 93	AK3	C	598	610	Right-handed alpha
Helix 94	AK4	C	612	616	Right-handed 310
Helix 95	AK5	C	625	629	Right-handed 310
Helix 96	AK6	C	630	634	Right-handed 310
Helix 97	AK7	C	651	662	Right-handed alpha
Helix 98	AK8	C	671	679	Right-handed alpha
Helix 99	AK9	C	684	716	Right-handed alpha
Helix 100	AL1	C	732	741	Right-handed alpha
Helix 101	AL2	C	748	760	Right-handed alpha
Helix 102	AL3	D	42	49	Right-handed alpha
Helix 103	AL4	D	86	91	Right-handed alpha
Helix 104	AL5	D	135	139	Right-handed 310
Helix 105	AL6	D	191	201	Right-handed alpha
Helix 106	AL7	D	210	226	Right-handed alpha
Helix 107	AL8	D	226	234	Right-handed alpha
Helix 108	AL9	D	251	263	Right-handed alpha
Helix 109	AM1	D	271	277	Right-handed alpha
Helix 110	AM2	D	278	295	Right-handed alpha
Helix 111	AM3	D	305	309	Right-handed 310
Helix 112	AM4	D	319	333	Right-handed alpha
Helix 113	AM5	D	349	353	Right-handed 310
Helix 114	AM6	D	373	385	Right-handed alpha
Helix 115	AM7	D	395	402	Right-handed alpha
Helix 116	AM8	D	409	427	Right-handed alpha
Helix 117	AM9	D	436	445	Right-handed alpha
Helix 118	AN1	D	448	458	Right-handed alpha
Helix 119	AN2	D	475	479	Right-handed 310
Helix 120	AN3	D	482	493	Right-handed alpha
Helix 121	AN4	D	494	498	Right-handed 310
Helix 122	AN5	D	499	507	Right-handed alpha
Helix 123	AN6	D	523	536	Right-handed alpha
Helix 124	AN7	D	543	554	Right-handed alpha
Helix 125	AN8	D	558	569	Right-handed alpha
Helix 126	AN9	D	580	586	Right-handed alpha
Helix 127	AO1	D	598	610	Right-handed alpha
Helix 128	AO2	D	612	616	Right-handed 310
Helix 129	AO3	D	625	629	Right-handed 310
Helix 130	AO4	D	630	634	Right-handed 310
Helix 131	AO5	D	651	662	Right-handed alpha
Helix 132	AO6	D	671	679	Right-handed alpha
Helix 133	AO7	D	684	716	Right-handed alpha
Helix 134	AO8	D	732	741	Right-handed alpha
Helix 135	AO9	D	748	760	Right-handed alpha
Helix 136	AP1	E	42	49	Right-handed alpha
Helix 137	AP2	E	86	91	Right-handed alpha
Helix 138	AP3	E	135	139	Right-handed 310
Helix 139	AP4	E	192	201	Right-handed alpha
Helix 140	AP5	E	210	226	Right-handed alpha
Helix 141	AP6	E	226	234	Right-handed alpha
Helix 142	AP7	E	251	263	Right-handed alpha
Helix 143	AP8	E	271	277	Right-handed alpha
Helix 144	AP9	E	278	295	Right-handed alpha
Helix 145	AQ1	E	305	309	Right-handed 310
Helix 146	AQ2	E	319	333	Right-handed alpha
Helix 147	AQ3	E	373	385	Right-handed alpha
Helix 148	AQ4	E	395	402	Right-handed alpha
Helix 149	AQ5	E	409	427	Right-handed alpha
Helix 150	AQ6	E	436	445	Right-handed alpha
Helix 151	AQ7	E	448	458	Right-handed alpha
Helix 152	AQ8	E	475	479	Right-handed 310
Helix 153	AQ9	E	482	494	Right-handed alpha
Helix 154	AR1	E	495	498	Right-handed 310
Helix 155	AR2	E	499	507	Right-handed alpha
Helix 156	AR3	E	523	536	Right-handed alpha
Helix 157	AR4	E	543	553	Right-handed alpha
Helix 158	AR5	E	558	569	Right-handed alpha
Helix 159	AR6	E	580	586	Right-handed alpha
Helix 160	AR7	E	598	610	Right-handed alpha
Helix 161	AR8	E	612	616	Right-handed 310
Helix 162	AR9	E	625	629	Right-handed 310
Helix 163	AS1	E	630	634	Right-handed 310
Helix 164	AS2	E	651	662	Right-handed alpha
Helix 165	AS3	E	671	679	Right-handed alpha
Helix 166	AS4	E	684	716	Right-handed alpha
Helix 167	AS5	E	732	741	Right-handed alpha
Helix 168	AS6	E	748	760	Right-handed alpha
Helix 169	AS7	F	42	49	Right-handed alpha
Helix 170	AS8	F	86	91	Right-handed alpha
Helix 171	AS9	F	135	139	Right-handed 310
Helix 172	AT1	F	190	201	Right-handed alpha
Helix 173	AT2	F	210	226	Right-handed alpha
Helix 174	AT3	F	226	234	Right-handed alpha
Helix 175	AT4	F	251	263	Right-handed alpha
Helix 176	AT5	F	271	277	Right-handed alpha
Helix 177	AT6	F	278	295	Right-handed alpha
Helix 178	AT7	F	305	309	Right-handed 310
Helix 179	AT8	F	319	333	Right-handed alpha
Helix 180	AT9	F	354	358	Right-handed 310
Helix 181	AU1	F	373	385	Right-handed alpha
Helix 182	AU2	F	395	402	Right-handed alpha
Helix 183	AU3	F	409	427	Right-handed alpha
Helix 184	AU4	F	436	445	Right-handed alpha
Helix 185	AU5	F	448	458	Right-handed alpha
Helix 186	AU6	F	475	479	Right-handed 310
Helix 187	AU7	F	482	493	Right-handed alpha
Helix 188	AU8	F	494	498	Right-handed 310
Helix 189	AU9	F	499	507	Right-handed alpha
Helix 190	AV1	F	523	536	Right-handed alpha
Helix 191	AV2	F	543	553	Right-handed alpha
Helix 192	AV3	F	558	569	Right-handed alpha
Helix 193	AV4	F	580	586	Right-handed alpha
Helix 194	AV5	F	598	610	Right-handed alpha
Helix 195	AV6	F	612	616	Right-handed 310
Helix 196	AV7	F	625	629	Right-handed 310
Helix 197	AV8	F	630	634	Right-handed 310
Helix 198	AV9	F	651	662	Right-handed alpha
Helix 199	AW1	F	671	679	Right-handed alpha
Helix 200	AW2	F	684	716	Right-handed alpha
Helix 201	AW3	F	732	741	Right-handed alpha
Helix 202	AW4	F	748	760	Right-handed alpha

There are 18 sheets in PDB entry 8RS9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	60	first strand
Strand 2	A	99	104	anti-parallel
Strand 3	A	26	29	anti-parallel
Strand 4	A	81	83	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	270	first strand
Strand 2	A	299	304	parallel
Strand 3	A	341	346	parallel
Strand 4	A	240	243	parallel
Strand 5	A	365	367	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	542	first strand
Strand 2	A	572	576	parallel
Strand 3	A	618	621	parallel
Strand 4	A	513	517	parallel
Strand 5	A	642	644	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	60	first strand
Strand 2	B	99	104	anti-parallel
Strand 3	B	26	29	anti-parallel
Strand 4	B	81	83	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	270	first strand
Strand 2	B	299	304	parallel
Strand 3	B	341	346	parallel
Strand 4	B	240	243	parallel
Strand 5	B	365	367	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	542	first strand
Strand 2	B	572	576	parallel
Strand 3	B	618	621	parallel
Strand 4	B	513	517	parallel
Strand 5	B	642	644	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	60	first strand
Strand 2	C	99	104	anti-parallel
Strand 3	C	26	29	anti-parallel
Strand 4	C	81	83	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	270	first strand
Strand 2	C	299	304	parallel
Strand 3	C	341	346	parallel
Strand 4	C	240	243	parallel
Strand 5	C	365	367	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	542	first strand
Strand 2	C	572	576	parallel
Strand 3	C	618	621	parallel
Strand 4	C	513	517	parallel
Strand 5	C	642	644	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	60	first strand
Strand 2	D	99	104	anti-parallel
Strand 3	D	26	29	anti-parallel
Strand 4	D	81	83	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	270	first strand
Strand 2	D	299	304	parallel
Strand 3	D	341	346	parallel
Strand 4	D	240	243	parallel
Strand 5	D	365	367	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	538	542	first strand
Strand 2	D	572	576	parallel
Strand 3	D	618	621	parallel
Strand 4	D	513	517	parallel
Strand 5	D	642	644	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	57	60	first strand
Strand 2	E	99	104	anti-parallel
Strand 3	E	26	29	anti-parallel
Strand 4	E	81	83	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	270	first strand
Strand 2	E	299	304	parallel
Strand 3	E	341	346	parallel
Strand 4	E	240	243	parallel
Strand 5	E	365	367	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	538	542	first strand
Strand 2	E	572	576	parallel
Strand 3	E	618	621	parallel
Strand 4	E	513	517	parallel
Strand 5	E	642	644	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	57	60	first strand
Strand 2	F	99	104	anti-parallel
Strand 3	F	26	29	anti-parallel
Strand 4	F	81	83	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	265	270	first strand
Strand 2	F	299	304	parallel
Strand 3	F	341	346	parallel
Strand 4	F	240	243	parallel
Strand 5	F	365	367	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	538	542	first strand
Strand 2	F	572	576	parallel
Strand 3	F	618	621	parallel
Strand 4	F	513	517	parallel
Strand 5	F	642	644	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RS9

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RS9