Analysis of interatomic Contacts of Structural Units in PDB entry:
8RSL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RSL entry

There are 2 chains in PDB entry 8RSL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG -6ASP 264
B
 ARG -6ASP 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 8RSL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 22Right-handed alpha
Helix 2
AA2
A
33 48Right-handed alpha
Helix 3
AA3
A
54 70Right-handed alpha
Helix 4
AA4
A
77 79Right-handed 310
Helix 5
AA5
A
93 95Right-handed 310
Helix 6
AA6
A
120 130Right-handed alpha
Helix 7
AA7
A
130 145Right-handed alpha
Helix 8
AA8
A
180 201Right-handed alpha
Helix 9
AA9
A
219 239Right-handed alpha
Helix 10
AB1
A
250 263Right-handed alpha
Helix 11
AB2
B
0 22Right-handed alpha
Helix 12
AB3
B
33 48Right-handed alpha
Helix 13
AB4
B
54 70Right-handed alpha
Helix 14
AB5
B
77 79Right-handed 310
Helix 15
AB6
B
93 95Right-handed 310
Helix 16
AB7
B
120 130Right-handed alpha
Helix 17
AB8
B
130 145Right-handed alpha
Helix 18
AB9
B
180 201Right-handed alpha
Helix 19
AC1
B
219 239Right-handed alpha
Helix 20
AC2
B
250 264Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 8RSL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
97 98parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
243 248parallel
Strand 3
A
205 208parallel
Strand 4
A
101 105parallel
Strand 5
A
165 169parallel
Strand 6
A
154 157anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 75first strand
Strand 2
B
97 98parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 91first strand
Strand 2
B
243 248parallel
Strand 3
B
205 208parallel
Strand 4
B
101 106parallel
Strand 5
B
165 170parallel
Strand 6
B
154 157anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il