Analysis of interatomic Contacts of Structural Units in PDB entry:
8RTL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RTL entry

There are 3 chains in PDB entry 8RTL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 4	ALA 825
B	LEU 0	ILE 133
C	ASN 4	ILE 323

There are154 helices in PDB entry 8RTL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	48	Right-handed 310
Helix 2	AA2	A	66	68	Right-handed 310
Helix 3	AA3	A	101	103	Right-handed 310
Helix 4	AA4	A	104	109	Right-handed alpha
Helix 5	AA5	A	135	155	Right-handed alpha
Helix 6	AA6	A	172	185	Right-handed alpha
Helix 7	AA7	A	204	211	Right-handed alpha
Helix 8	AA8	A	218	225	Right-handed alpha
Helix 9	AA9	A	234	239	Right-handed alpha
Helix 10	AB1	A	239	246	Right-handed alpha
Helix 11	AB2	A	246	252	Right-handed alpha
Helix 12	AB3	A	255	263	Right-handed alpha
Helix 13	AB4	A	281	292	Right-handed alpha
Helix 14	AB5	A	305	321	Right-handed alpha
Helix 15	AB6	A	324	331	Right-handed alpha
Helix 16	AB7	A	334	342	Right-handed alpha
Helix 17	AB8	A	345	354	Right-handed alpha
Helix 18	AB9	A	356	368	Right-handed alpha
Helix 19	AC1	A	384	389	Right-handed alpha
Helix 20	AC2	A	392	407	Right-handed alpha
Helix 21	AC3	A	439	446	Right-handed alpha
Helix 22	AC4	A	458	463	Right-handed alpha
Helix 23	AC5	A	465	485	Right-handed alpha
Helix 24	AC6	A	491	504	Right-handed alpha
Helix 25	AC7	A	518	523	Right-handed 310
Helix 26	AC8	A	562	581	Right-handed alpha
Helix 27	AC9	A	583	590	Right-handed alpha
Helix 28	AD1	A	597	605	Right-handed alpha
Helix 29	AD2	A	621	628	Right-handed 310
Helix 30	AD3	A	629	637	Right-handed alpha
Helix 31	AD4	A	638	640	Right-handed 310
Helix 32	AD5	A	684	694	Right-handed alpha
Helix 33	AD6	A	712	715	Right-handed 310
Helix 34	AD7	A	716	723	Right-handed alpha
Helix 35	AD8	A	731	739	Right-handed alpha
Helix 36	AD9	A	780	785	Right-handed 310
Helix 37	AE1	A	810	817	Right-handed alpha
Helix 38	AE2	B	15	17	Right-handed 310
Helix 39	AE3	C	44	48	Right-handed 310
Helix 40	AE4	C	66	68	Right-handed 310
Helix 41	AE5	C	101	103	Right-handed 310
Helix 42	AE6	C	104	109	Right-handed alpha
Helix 43	AE7	C	135	154	Right-handed alpha
Helix 44	AE8	C	155	157	Right-handed 310
Helix 45	AE9	C	172	185	Right-handed alpha
Helix 46	AF1	C	204	211	Right-handed alpha
Helix 47	AF2	C	218	225	Right-handed alpha
Helix 48	AF3	C	234	239	Right-handed alpha
Helix 49	AF4	C	239	246	Right-handed alpha
Helix 50	AF5	C	246	252	Right-handed alpha
Helix 51	AF6	C	255	263	Right-handed alpha
Helix 52	AF7	C	281	292	Right-handed alpha
Helix 53	AF8	C	305	321	Right-handed alpha
Helix 54	AF9	C	324	331	Right-handed alpha
Helix 55	AG1	C	334	342	Right-handed alpha
Helix 56	AG2	C	345	354	Right-handed alpha
Helix 57	AG3	C	356	368	Right-handed alpha
Helix 58	AG4	C	384	389	Right-handed alpha
Helix 59	AG5	C	392	407	Right-handed alpha
Helix 60	AG6	C	439	446	Right-handed alpha
Helix 61	AG7	C	458	463	Right-handed alpha
Helix 62	AG8	C	465	485	Right-handed alpha
Helix 63	AG9	C	491	504	Right-handed alpha
Helix 64	AH1	C	518	523	Right-handed 310
Helix 65	AH2	C	562	581	Right-handed alpha
Helix 66	AH3	C	583	589	Right-handed alpha
Helix 67	AH4	C	597	605	Right-handed alpha
Helix 68	AH5	C	621	628	Right-handed 310
Helix 69	AH6	C	629	637	Right-handed alpha
Helix 70	AH7	C	638	640	Right-handed 310
Helix 71	AH8	C	684	694	Right-handed alpha
Helix 72	AH9	C	712	715	Right-handed 310
Helix 73	AI1	C	716	723	Right-handed alpha
Helix 74	AI2	C	731	739	Right-handed alpha
Helix 75	AI3	C	780	785	Right-handed 310
Helix 76	AI4	C	810	817	Right-handed alpha
Helix 77	AI5	D	15	17	Right-handed 310
Helix 78	AI6	E	44	48	Right-handed 310
Helix 79	AI7	E	66	68	Right-handed 310
Helix 80	AI8	E	101	103	Right-handed 310
Helix 81	AI9	E	104	109	Right-handed alpha
Helix 82	AJ1	E	135	155	Right-handed alpha
Helix 83	AJ2	E	172	185	Right-handed alpha
Helix 84	AJ3	E	204	211	Right-handed alpha
Helix 85	AJ4	E	218	225	Right-handed alpha
Helix 86	AJ5	E	234	239	Right-handed alpha
Helix 87	AJ6	E	239	246	Right-handed alpha
Helix 88	AJ7	E	246	252	Right-handed alpha
Helix 89	AJ8	E	255	263	Right-handed alpha
Helix 90	AJ9	E	281	292	Right-handed alpha
Helix 91	AK1	E	305	321	Right-handed alpha
Helix 92	AK2	E	324	331	Right-handed alpha
Helix 93	AK3	E	334	342	Right-handed alpha
Helix 94	AK4	E	345	354	Right-handed alpha
Helix 95	AK5	E	356	368	Right-handed alpha
Helix 96	AK6	E	384	389	Right-handed alpha
Helix 97	AK7	E	392	407	Right-handed alpha
Helix 98	AK8	E	439	446	Right-handed alpha
Helix 99	AK9	E	458	463	Right-handed alpha
Helix 100	AL1	E	465	485	Right-handed alpha
Helix 101	AL2	E	491	504	Right-handed alpha
Helix 102	AL3	E	518	523	Right-handed 310
Helix 103	AL4	E	562	581	Right-handed alpha
Helix 104	AL5	E	583	589	Right-handed alpha
Helix 105	AL6	E	597	605	Right-handed alpha
Helix 106	AL7	E	606	609	Right-handed 310
Helix 107	AL8	E	621	628	Right-handed 310
Helix 108	AL9	E	629	637	Right-handed alpha
Helix 109	AM1	E	638	640	Right-handed 310
Helix 110	AM2	E	684	694	Right-handed alpha
Helix 111	AM3	E	712	715	Right-handed 310
Helix 112	AM4	E	716	723	Right-handed alpha
Helix 113	AM5	E	731	739	Right-handed alpha
Helix 114	AM6	E	780	785	Right-handed 310
Helix 115	AM7	E	810	817	Right-handed alpha
Helix 116	AM8	F	15	17	Right-handed 310
Helix 117	AM9	G	44	48	Right-handed 310
Helix 118	AN1	G	66	68	Right-handed 310
Helix 119	AN2	G	101	103	Right-handed 310
Helix 120	AN3	G	104	109	Right-handed alpha
Helix 121	AN4	G	135	155	Right-handed alpha
Helix 122	AN5	G	172	185	Right-handed alpha
Helix 123	AN6	G	204	211	Right-handed alpha
Helix 124	AN7	G	218	225	Right-handed alpha
Helix 125	AN8	G	234	239	Right-handed alpha
Helix 126	AN9	G	239	246	Right-handed alpha
Helix 127	AO1	G	246	252	Right-handed alpha
Helix 128	AO2	G	255	263	Right-handed alpha
Helix 129	AO3	G	281	292	Right-handed alpha
Helix 130	AO4	G	305	321	Right-handed alpha
Helix 131	AO5	G	324	331	Right-handed alpha
Helix 132	AO6	G	334	342	Right-handed alpha
Helix 133	AO7	G	345	354	Right-handed alpha
Helix 134	AO8	G	356	368	Right-handed alpha
Helix 135	AO9	G	384	389	Right-handed alpha
Helix 136	AP1	G	392	407	Right-handed alpha
Helix 137	AP2	G	439	446	Right-handed alpha
Helix 138	AP3	G	458	463	Right-handed alpha
Helix 139	AP4	G	465	485	Right-handed alpha
Helix 140	AP5	G	491	504	Right-handed alpha
Helix 141	AP6	G	518	523	Right-handed 310
Helix 142	AP7	G	562	581	Right-handed alpha
Helix 143	AP8	G	583	589	Right-handed alpha
Helix 144	AP9	G	597	605	Right-handed alpha
Helix 145	AQ1	G	621	628	Right-handed 310
Helix 146	AQ2	G	629	637	Right-handed alpha
Helix 147	AQ3	G	638	640	Right-handed 310
Helix 148	AQ4	G	684	694	Right-handed alpha
Helix 149	AQ5	G	712	715	Right-handed 310
Helix 150	AQ6	G	716	723	Right-handed alpha
Helix 151	AQ7	G	731	739	Right-handed alpha
Helix 152	AQ8	G	780	785	Right-handed 310
Helix 153	AQ9	G	810	817	Right-handed alpha
Helix 154	AR1	H	15	17	Right-handed 310

There are 44 sheets in PDB entry 8RTL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	20	first strand
Strand 2	A	29	36	anti-parallel
Strand 3	A	80	87	anti-parallel
Strand 4	A	70	74	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	133	first strand
Strand 2	A	124	126	anti-parallel
Strand 3	A	526	529	anti-parallel
Strand 4	A	509	514	parallel
Strand 5	A	451	455	parallel
Strand 6	A	159	163	parallel
Strand 7	A	192	194	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	299	first strand
Strand 2	A	272	276	parallel
Strand 3	A	227	231	parallel
Strand 4	A	379	383	parallel
Strand 5	A	417	419	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	332	333	first strand
Strand 2	A	673	674	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	428	429	first strand
Strand 2	A	618	619	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	541	first strand
Strand 2	A	546	550	anti-parallel
Strand 3	A	641	642	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	647	649	first strand
Strand 2	A	653	655	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	696	701	first strand
Strand 2	A	769	773	parallel
Strand 3	A	727	730	anti-parallel
Strand 4	A	754	761	parallel
Strand 5	A	744	749	anti-parallel
Strand 6	A	801	809	anti-parallel
Strand 7	A	696	701	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	115	122	anti-parallel
Strand 3	B	104	109	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	26	first strand
Strand 2	B	33	38	anti-parallel
Strand 3	B	53	57	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	70	first strand
Strand 2	B	75	77	anti-parallel
Strand 3	B	84	86	anti-parallel
Strand 4	B	93	95	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	20	first strand
Strand 2	C	29	36	anti-parallel
Strand 3	C	80	87	anti-parallel
Strand 4	C	70	74	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	124	126	anti-parallel
Strand 3	C	526	529	anti-parallel
Strand 4	C	509	514	parallel
Strand 5	C	451	455	parallel
Strand 6	C	159	163	parallel
Strand 7	C	192	194	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	296	299	first strand
Strand 2	C	272	276	parallel
Strand 3	C	227	231	parallel
Strand 4	C	379	383	parallel
Strand 5	C	417	419	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	332	333	first strand
Strand 2	C	673	674	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	428	429	first strand
Strand 2	C	618	619	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	541	first strand
Strand 2	C	546	550	anti-parallel
Strand 3	C	641	642	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	647	649	first strand
Strand 2	C	653	655	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	696	701	first strand
Strand 2	C	769	773	parallel
Strand 3	C	727	730	anti-parallel
Strand 4	C	754	761	parallel
Strand 5	C	744	749	anti-parallel
Strand 6	C	801	809	anti-parallel
Strand 7	C	696	701	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	13	first strand
Strand 2	D	115	122	anti-parallel
Strand 3	D	104	109	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	23	26	first strand
Strand 2	D	33	38	anti-parallel
Strand 3	D	53	57	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	70	first strand
Strand 2	D	75	77	anti-parallel
Strand 3	D	84	86	anti-parallel
Strand 4	D	93	95	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	20	first strand
Strand 2	E	29	36	anti-parallel
Strand 3	E	80	87	anti-parallel
Strand 4	E	70	74	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	133	first strand
Strand 2	E	124	126	anti-parallel
Strand 3	E	526	529	anti-parallel
Strand 4	E	509	514	parallel
Strand 5	E	451	455	parallel
Strand 6	E	159	163	parallel
Strand 7	E	192	194	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	296	299	first strand
Strand 2	E	272	276	parallel
Strand 3	E	227	231	parallel
Strand 4	E	379	383	parallel
Strand 5	E	417	419	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	332	333	first strand
Strand 2	E	673	674	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	428	429	first strand
Strand 2	E	618	619	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	538	541	first strand
Strand 2	E	546	550	anti-parallel
Strand 3	E	641	642	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	647	649	first strand
Strand 2	E	653	655	anti-parallel

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There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	696	701	first strand
Strand 2	E	769	773	parallel
Strand 3	E	727	730	anti-parallel
Strand 4	E	754	761	parallel
Strand 5	E	744	749	anti-parallel
Strand 6	E	801	809	anti-parallel
Strand 7	E	696	701	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	9	13	first strand
Strand 2	F	115	122	anti-parallel
Strand 3	F	104	109	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	23	26	first strand
Strand 2	F	33	38	anti-parallel
Strand 3	F	53	57	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	70	first strand
Strand 2	F	75	77	anti-parallel
Strand 3	F	84	86	anti-parallel
Strand 4	F	93	95	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	15	20	first strand
Strand 2	G	29	36	anti-parallel
Strand 3	G	80	87	anti-parallel
Strand 4	G	70	74	anti-parallel

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There are 7 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	131	133	first strand
Strand 2	G	124	126	anti-parallel
Strand 3	G	526	529	anti-parallel
Strand 4	G	509	514	parallel
Strand 5	G	451	455	parallel
Strand 6	G	159	163	parallel
Strand 7	G	192	194	parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	296	299	first strand
Strand 2	G	272	276	parallel
Strand 3	G	227	231	parallel
Strand 4	G	379	383	parallel
Strand 5	G	417	419	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	332	333	first strand
Strand 2	G	673	674	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	428	429	first strand
Strand 2	G	618	619	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	538	541	first strand
Strand 2	G	546	550	anti-parallel
Strand 3	G	641	642	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	647	649	first strand
Strand 2	G	653	655	anti-parallel

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There are 7 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	696	701	first strand
Strand 2	G	769	773	parallel
Strand 3	G	727	730	anti-parallel
Strand 4	G	754	761	parallel
Strand 5	G	744	749	anti-parallel
Strand 6	G	801	809	anti-parallel
Strand 7	G	696	701	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	9	13	first strand
Strand 2	H	115	122	anti-parallel
Strand 3	H	104	109	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	23	26	first strand
Strand 2	H	33	38	anti-parallel
Strand 3	H	53	57	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	68	70	first strand
Strand 2	H	75	77	anti-parallel
Strand 3	H	84	86	anti-parallel
Strand 4	H	93	95	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 8RTL

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RTL